Haliotis rufescens (red abalone): 124132492
Help
Entry
124132492 CDS
T07893
Name
(RefSeq) tripartite motif-containing protein 3-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124132492
04121 Ubiquitin system [BR:
hrf04121
]
124132492
Enzymes [BR:
hrf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124132492
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124132492
Ubiquitin system [BR:
hrf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124132492
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-B_box
zf-RING_5
zf-RING_10
DUF3583
FapA
VD10_N
Jnk-SapK_ap_N
Motif
Other DBs
NCBI-GeneID:
124132492
NCBI-ProteinID:
XP_046352374
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MMATSRADKVMEFLTCVICTDLYTDPCTLRCDHTFCRKCVTGYIQTRPDAVQSKTIPCAF
CRQDTNVPDPSRQVEEWAGQIKPSIIIQGLIDTQADVVETGSASCCSVCEKLGETTPGAS
WCSECQVSLCERCVKMHGASPASHDHEICDLSGEVKVKRRRKVMCREHKDEVIKLVCKDC
NKAVCQTCCVIYHRKCESVITIQSMLPNLKYHLRKHAKQLSKKIHRKETIVSGIEKNKIA
VENHIKSAVERAIANIKQKEKQLMNEVKDITDKQTKELKADVKLEEIEMQMYRQHCEFID
QALVSDCEMDLYDANQAWESGAVEVGDVRDTDTADTRRIDDISFTPDTDNVQHILDDLQL
GGIDVTHQDQGTCLPSPVQVDVIDGKMAGDEVEPALRDVTVLVVDGIQTVVVTDFNNKCV
KSFYTRNNQLCQSKLPLDGSPWGVTQLKENQVMVAVPNSSQIVTVEVTPDLVLLSTITTR
KDYYSLAVLSPSSLVSGCRVCVDILDIAGHVLRSVTTHNNDTLFTYPWYMCVTNKGNILV
SDSQEQSVTCVTSEGDVVWRYAPTGDRAIIPYGISTTPTGDILLADSNKVIRLTETGDYV
TGHKDIGCDPWGLYVDRHDTLYVCGGGQTHEVNFM
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgacgtcacgagctgacaaagtaatggaattcctcacctgtgtgatctgcaca
gacctgtacacagacccctgtacactgaggtgtgatcacacattctgcaggaaatgtgtc
acaggatacatccaaaccagaccagatgccgtacagtccaagacgatcccctgtgccttc
tgtcgacaagataccaatgtccccgaccccagccggcaagtggaggagtgggcggggcag
attaaacccagcatcattatacaggggctgattgacacacaagctgacgttgtcgaaaca
ggttccgcttcatgttgctcagtgtgtgagaagttaggggagacaactccgggagcctca
tggtgttctgagtgtcaagtgtccctctgcgagagatgtgtcaagatgcatggtgcaagt
ccagcatcacatgaccatgaaatctgtgacctttcaggagaggtcaaggtgaagaggaga
cgcaaggtcatgtgcagggaacataaggatgaggttataaagcttgtgtgtaaagactgc
aacaaagctgtgtgtcagacatgttgtgttatttaccataggaaatgtgagtctgtcatt
accattcagtcaatgttgccaaacctgaaataccatttaagaaagcatgctaaacagtta
tcaaagaaaatacatagaaaagaaacaattgttagcggaattgagaaaaacaaaatagca
gtagaaaatcacattaaatctgctgttgagagagccatagccaacatcaagcagaaagaa
aaacagctgatgaacgaagtcaaagatattacagacaaacaaacaaaggaacttaaagca
gatgttaagcttgaagagattgagatgcagatgtacagacaacattgtgagttcattgac
caggccttggtatcagactgtgagatggacctgtatgacgcgaatcaggcctgggagtcg
ggggctgtagaggtaggggatgtcagggacacagacacagcagacacacggagaatagat
gacatcagtttcacacctgacactgacaacgtccagcacatcctagatgacctacagctg
ggggggattgacgtcacacaccaggatcagggcacatgtctgccgtctccagtgcaagtt
gacgtgatagatgggaagatggcgggcgatgaggtggagcctgctctacgtgacgtcaca
gtcctggttgtagatggtatacagacagttgtagtcactgacttcaataacaagtgtgtg
aaatccttctacactagaaacaatcaactgtgtcaaagtaaacttcccctggatggctct
ccatggggtgtaacacagttgaaggagaaccaggtgatggttgctgtccctaactccagt
cagattgtaacagtagaagtgacccctgacctggtgctgctctcaaccatcacaacaagg
aaggactactacagtctcgctgttctgagtccttcatctctagtatcaggttgtcgggtc
tgtgttgatatcctggacatagcgggacacgtgctgaggtcagttactacacacaacaat
gatacactgtttacctacccctggtacatgtgtgtcaccaacaagggcaacatactcgtg
tctgacagtcaggagcagtctgtgacatgtgtgacgtcagagggggatgttgtgtggaga
tacgcccctactggagacagagcaatcatcccttatggtatctcaactactccaacagga
gacatcctgcttgcagacagcaacaaggtgatacggctgacagagacaggggattatgtc
acaggtcataaagacattggctgtgatccatggggattgtatgtcgatagacatgacaca
ctgtatgtttgtggtggaggtcagacacacgaagtcaacttcatgtag
DBGET
integrated database retrieval system
