Haliotis rufescens (red abalone): 124138106
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Entry
124138106 CDS
T07893
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124138106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrf03021
]
124138106
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124138106
Transcription machinery [BR:
hrf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
124138106
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124138106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_2
zf-CCCH_4
zf-CCHC_3
zf-C3H1
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
124138106
NCBI-ProteinID:
XP_046360601
LinkDB
All DBs
Position
Unknown
AA seq
258 aa
AA seq
DB search
MQEIVAPVYNITFDIEVALDQQLGALPLPFPGMDKSGSATCIFHLRHQCNKGTACPFRHV
RGDRTVVCKHWLRGLCKKGDDCEFLHEYDMSKMPECYFYSKFGQCSNKECPFLHIDPEKK
MKDCPWYDRGFCRHGPNCKNRHVRRLICQSYVNGFCIEGPSCKYQHPKFDLPVSDPVQQA
KKASIVCHFCGEAGHKVLNCTKMPNNVKMEQIMQMNDTSICDQRRPLDQVTCYKCGEKGH
YANRCTKGHLAFLSSSAT
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagattgtggcgcccgtgtataatataacgttcgacatagaagttgccttggat
cagcaactaggggccctgccgttgcctttccctggcatggacaaatctgggtcagcaaca
tgtatcttccatctacgacatcagtgtaacaagggcacggcatgtcccttccgtcatgtt
cgaggtgacagaacagttgtgtgcaaacattggcttcgtggactctgtaagaagggagat
gactgtgaattcttacatgagtatgacatgtccaagatgccagagtgttatttctattcc
aaatttggtcagtgtagtaataaagaatgtccgtttcttcacatcgatcctgaaaagaag
atgaaagattgtccatggtatgacagaggtttctgtcgtcatggtcctaattgcaagaac
agacatgtgaggagactgatctgtcaaagctacgtcaatggcttctgtattgagggcccc
agctgtaaataccagcatcccaagtttgacttgccagtcagtgacccagtccagcaggcc
aagaaggcgtccattgtctgtcacttctgtggagaggcaggtcacaaagttctcaactgt
accaagatgcccaacaatgtcaagatggagcagatcatgcagatgaacgatacttccatt
tgtgatcaacgccggcctctcgatcaggtcacatgttacaagtgtggcgagaagggtcac
tacgccaacaggtgcaccaagggtcacctggccttcctcagctccagtgcaacataa
DBGET
integrated database retrieval system
