Haliotis rufescens (red abalone): 124147426
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Entry
124147426 CDS
T07893
Name
(RefSeq) X-ray repair cross-complementing protein 5-like
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
124147426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrf03400
]
124147426
DNA repair and recombination proteins [BR:
hrf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
124147426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
VWA
VWA_3
Motif
Other DBs
NCBI-GeneID:
124147426
NCBI-ProteinID:
XP_046374049
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MAANKEAIAIVLDVGPSMNQAPPGEVSALQTAIDAITMILQRKMFSESKDEVALVLFGTD
GTDNPLADGDSYQNITIARPIGVADFDLLQQVKDEIQPSDTAADFLDALVVAMDHLVQGI
QGKRGFASKRVILLSDLGGEFGDDQLDTIIGALHNSGTNLDVIGPNIEDDEDEEGGGDAG
GASVNGHRKEKTPQQRAGEAMVKHILDQVEGECYSFSEALPALSYFTARQVRPTAWKCTM
DIGPDLRIPINFYGKIKDFKLKQSWKKVYAKDPDQKVGNLRTQHMNDEEETEMEKEDIVQ
GYRYGNTLVPMSEDDKENMKYRAEKCLKVLGFTKSENVRRHHFLGDGTNVVFAEKGDEAA
GVALSAMINALYETNMVVIARRVYSSASGPKLGVLWPSIKANYECLYWAEIPFAEDLRQF
TFGTLPITDEGETNKKYKPTAEQLTAVDELITSMDLSQAAGDDDDEEEKTEVLKPKLTFN
PYFQRLYQCLQHRAENTDEGLPELSPIIASYLKPPQEIITNCEEHVEKIKKLFKLEMVTK
KKEEQTGETMFKDNEAEAGSAPKRQKLDDNLEGGMQDITRAKVTQVGTVTPTADFQALIT
RKDEDMFEEACKQMQKRVEQIVTDSFGTQFYGKAMECLKALRQECIKKQEAKVYNDFMTK
YKDKLIGKGKRDFWDQIVQDKQALITKMECEDGGVSKEEANKFVEEEVKDEPAPAADAET
TDDLMDQLE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaacaaggaagccatagctattgtgctggatgtgggcccctcaatgaatcag
gcaccgccgggggaggtgtccgcgctgcagacggccatcgatgccatcaccatgatcctc
cagaggaagatgttctccgagtctaaggatgaggtggctctggttctgtttggtactgat
ggcacggacaaccccctggctgatggagatagctaccaaaacatcaccatcgccagacct
attggggtcgcggactttgacctgctccagcaggtgaaggatgagattcagccctcggac
acagcagccgacttcctggatgcactggttgttgccatggatcatcttgtccagggaata
caaggtaagagagggtttgcctcgaagcgtgtcatcctgctgtcggacctggggggagag
ttcggagatgatcaactggacaccattattggcgccctccacaactcggggacgaatctc
gatgtcattggccccaacattgaggatgatgaggatgaggaagggggaggagatgcaggg
ggggcatcggtcaacggtcatcgcaaggaaaagacccctcagcagcgagcaggggaagct
atggtcaaacatattctggaccaagtggagggagaatgctattcgttcagtgaagcgctg
cctgccctgagttatttcaccgctcgccaggtccgcccgacagcatggaaatgtacaatg
gatattgggcctgatctccgcataccgattaacttttacggaaaaataaaagacttcaag
ttgaagcagagctggaagaaggtgtatgcaaaggatcctgaccaaaaggtgggcaacttg
cggacacagcacatgaacgacgaggaggagacagagatggagaaagaggacatcgtgcag
ggttatcgctatggtaacacattagtgccaatgtctgaagatgacaaagaaaacatgaag
tacagagcggagaaatgtctgaaggttcttggctttacaaaaagtgaaaatgtaagacgc
catcacttcctcggagatgggacaaatgttgtttttgcagagaaaggtgatgaggctgct
ggggtcgctctctctgccatgatcaacgccctctatgagacaaacatggtggtcatcgct
cgaagagtctactccagtgcctcaggacctaaacttggagttctctggccttccatcaag
gccaattatgagtgtttgtattgggcggaaatcccttttgccgaggacctacgtcagttt
acctttggaactctgcccatcactgatgagggtgaaaccaacaagaaatacaaacccact
gctgagcaactcactgcggtggatgaactcatcacatccatggacctgagccaggctgca
ggagatgatgacgacgaagaagaaaagacagaagtgctgaagcccaaactgacctttaac
ccctactttcagagattataccagtgcctacaacacagagcggagaacactgacgaggga
ttaccagagttatctcccattattgcaagctatctcaaaccaccacaagaaattatcaca
aactgcgaggaacatgtggagaaaattaaaaagctatttaaactagaaatggtaactaag
aagaaagaagaacaaactggagaaaccatgtttaaggataatgaggcggaggctgggtct
gctcccaaacgacaaaagctggatgacaacctggaaggagggatgcaggacatcactcgg
gcaaaggtcacgcaggttgggacggtgacgccgacagccgacttccaggccctcatcacc
aggaaggacgaagacatgtttgaagaagcttgcaaacagatgcagaagagagtggagcag
atagtgacggactcatttggcacccagttctacggcaaggccatggagtgtttgaaggca
ctcagacaggagtgtatcaagaaacaagaagcaaaggtgtacaatgacttcatgaccaaa
tacaaggacaagctcattggaaaaggaaagagagatttctgggatcaaatagttcaagat
aagcaggctctgatcaccaagatggagtgtgaagatggcggagtgtccaaggaggaggca
aacaagtttgtggaggaggaggtgaaagatgagccagctccagcagccgatgcagaaaca
actgacgacctgatggatcagttggagtag
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integrated database retrieval system
