Haliotis rubra (blacklip abalone): 124262816
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Entry
124262816 CDS
T07967
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03022
Basal transcription factors
hrj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124262816
09124 Replication and repair
03420 Nucleotide excision repair
124262816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrj03021
]
124262816
03400 DNA repair and recombination proteins [BR:
hrj03400
]
124262816
Transcription machinery [BR:
hrj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124262816
DNA repair and recombination proteins [BR:
hrj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124262816
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Motif
Other DBs
NCBI-GeneID:
124262816
NCBI-ProteinID:
XP_046553338
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MADEEEKGYRWETEYEKTWEALIEDDSGSLQASVDDIIQKAKKRKLLEKIGNIRLGMMRH
LFLIIDMSNSMNDQDLKPTRLFSSIKLCEKFIEEYFDQNPISQLGILTTRNKRAEKLTEL
GGNPRRHITALQGLEERACQGEPSLQNSMELAMQTLKHMPSHASREVLVVLGSLSTCDPG
DIDTTIKNLEELNVRCSVIGLAAEVRVCKKLCHKTHGKYNVILDETHFKDLLYQHVSPPP
ATSNTESSLIRMGFPHHTLNADRDREEKPSMCMCHADGKSGSQGFSNSGYFCPQCKSKYC
ELPIECKACGLTLVSAPHLARSYHHLFPLPPFKETPVSDLSANPKCYSCQVQITEQHVYT
CESCCQLFCLDCDLFIHETLHSCPGCSSFRGTQLQSQIPMIT
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaagaggaaaagggatacagatgggaaacagaatacgaaaaaacctgggag
gcccttatcgaggatgactctgggtcgctgcaggccagcgtggatgacatcatccagaag
gccaagaagaggaagctgctggagaagatcggcaacatacgactggggatgatgcgacat
cttttcttgataattgacatgtccaactcaatgaatgatcaagatttgaaaccaacaaga
ctcttttcgtccataaagctttgtgagaaattcatcgaagaatactttgatcagaacccg
atcagccaactgggcattctcaccacaaggaacaagcgtgcagaaaaacttacagaactt
ggaggcaacccaagacgccacatcacagctctacaaggactggaagagagagcatgtcaa
ggagagccgtcgttacagaactcgatggagctggccatgcagactctgaaacacatgcca
agtcacgctagccgggaggttctggttgtgttagggagtctgtccacgtgtgacccaggc
gacattgacaccacaataaagaacctggaggagttgaacgtccgctgctctgtgataggg
ctggctgctgaggtccgagtgtgcaagaaactgtgtcacaaaacacacgggaagtacaat
gtgatcctggatgagactcacttcaaggatctgctgtaccaacacgtatcacctcctcca
gcgacgtctaatacagaatcttctttgatcagaatgggcttcccccaccacacactgaac
gcagaccgagacagggaggaaaagccgtccatgtgcatgtgccatgctgatggaaagtct
gggagccaaggtttcagtaacagtggttacttctgtccccagtgtaaaagcaagtactgt
gagcttcctatagagtgcaaggcctgcggtttgacgctggtgtccgctccccacctcgcc
cggtcctaccatcacctgtttccgctgccaccattcaaggaaactccagtctcagacttg
tcagccaatccaaagtgctattcttgtcaagtccaaatcacagaacaacatgtgtatacc
tgtgagagctgctgccagttgttttgtcttgactgtgacctgttcatccacgagacactc
cactcctgccctggatgctccagcttcagggggacccagcttcagtctcaaatacccatg
attacatga
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