Haliotis rubra (blacklip abalone): 124265222
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Entry
124265222 CDS
T07967
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrj04121
]
124265222
Enzymes [BR:
hrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124265222
Ubiquitin system [BR:
hrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124265222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-B_box
zf-C3HC4_2
NHL
zf-RING_5
PEP-utilisers_N
DUF3086
Motif
Other DBs
NCBI-GeneID:
124265222
NCBI-ProteinID:
XP_046555971
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MFYTWGTISLYTALDDRAEKMATSQKLTEHYLTCIICSGVFSNPCTLVCNHTFCRKCIVN
YTKTRPEAISAKSLLCPFCSKMTKVSAPDRPVEKWADDVKPIFLIQGLLDSFGPGSKDTT
CCSYCKEEGETTPATVWCYVCDDALCGRCVRVHNRIPSARHHDVTDLFGEVKIKRRRVVM
CKEHKDESVQLLCKDCGKAVCQTCCTIYHRQCVSVVSLESEMQAMKAALTRATGNLSQRK
EKIHKEIETKKSKVEDETFRFKEMKSHINSETVKAIQQIKLKKRRLLNELKEMSDKYIGQ
MKADIKSGEMSVQMYQQQTELIDQALQSECDMDVYEMYQGCETGDVEAVGDADLKEGGRI
ASVTFRQDTDKLSKALNDLQVGEIEVLYESVLDLKATPVLHDTIDVKVAGDTRTVWPTGV
TVEVVGGRDTDYNNRSVKSFYTSNNQPGHSKLLVDEDPYDITKLTHDRVAVTVPNTKQIV
TVKVKPDLELQTTITTSKQYMGITSLTPSTLAASSHSPPCVDILDMTGNVLRSISPRHKG
NNILQDPNFLSTTRTGNTLVSDIGTKCIVCLTPEGDVVFNYRPTGDTALMYPRGITSTGT
GGILVTDYSLHRVIHRTESGQFVQNLLTSKDFIQSPRGLCIDERGWLRVCLLKGVIQTFS
CK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgttttacacctggggtacaatttccctctacaccgctcttgacgaccgagccgagaag
atggctacctctcagaagctgacggaacattacttaacctgtatcatctgctccggcgtc
ttcagtaatccatgtacacttgtgtgtaatcacaccttctgtcggaaatgtatcgtcaac
tacaccaaaaccagaccagaagctatcagtgctaagtccctcctgtgtccattctgcagc
aagatgacgaaagtgtctgcccctgacagacccgtggagaagtgggcggatgacgtcaaa
cctatctttctcatccagggactcttggactcgtttggtccgggatctaaagatacaacc
tgctgcagctattgtaaagaggaaggggagacaactcctgccactgtttggtgctatgtg
tgtgatgatgcgttatgtgggagatgcgtcagagttcacaaccgcatcccatcagctcgt
caccacgatgtcactgacctgttcggggaggtcaagatcaaacgaaggcgggtggtcatg
tgtaaagaacacaaggatgaaagtgttcagttgttgtgtaaagattgcgggaaagctgtt
tgccaaacctgttgtaccatctaccacaggcagtgtgtctctgtggtcagcttggaatca
gagatgcaggcaatgaaagcagcactgacgcgggcgacgggcaatttgtcacagagaaag
gagaaaatccacaaagagattgagacaaagaaatccaaggttgaagacgaaacatttcga
tttaaagaaatgaaatcacatattaactctgaaactgtcaaggcgatacaacagattaaa
ctcaagaaacggagacttctaaatgaactgaaagagatgtcagacaaatacatcggacaa
atgaaagcagacataaagtcaggtgagatgtcagtacagatgtaccaacaacagacggag
ctgatagaccaggctctacaatcggagtgtgacatggatgtgtatgagatgtatcaggga
tgtgagaccggtgatgtggaggctgtcggagacgctgacctgaaggagggaggaagaata
gccagtgtcacattccgacaggacacagacaagctgagtaaagcactgaacgatctacag
gtgggtgagatagaggtcctgtatgagagtgtgctggacctgaaggctactcctgtgtta
cacgacaccattgacgtcaaagtggcaggcgatacacgtacagtgtggcctactggagtg
acagtggaggtggtgggtggtagagacaccgactacaacaacaggagtgtgaagtccttc
tacaccagcaacaatcagccaggccacagtaagctcctggttgatgaagatccctatgat
attacgaagttgacacacgatcgggtagctgtcactgtaccaaacaccaaacagattgta
acagtaaaagtcaaaccagacctggagttacagacaaccatcacaaccagcaaacagtat
atgggtataacgtccctgactccatcaacactagcagctagttcccactctcctccctgt
gttgatatcctggatatgacaggaaacgtgctgaggtctatcagtccacgtcataaaggt
aacaacatcttacaggatcccaacttcctcagtaccacgaggacaggtaacacactggtg
tctgacataggaaccaagtgtatcgtgtgtctgacccccgagggagatgtggtgttcaac
tacagacctacaggagacacagcactgatgtatcctcggggtatcacaagtaccggcaca
ggcggcatcctggttacagactacagtctacacagagtcatccatcggactgagtcagga
cagtttgtacaaaatctgctgacatccaaggactttattcagagtccacgtggactgtgt
atagatgagagagggtggctgcgtgtttgtcttctcaaaggtgtcatacagacgttctcg
tgtaaatag
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integrated database retrieval system
