Haliotis rubra (blacklip abalone): 124265821
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Entry
124265821 CDS
T07967
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrj04121
]
124265821
Enzymes [BR:
hrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124265821
Ubiquitin system [BR:
hrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124265821
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
FYVE
zf-C3HC4_4
COG5_N
APG6_N
Effector_1
Cys_rich_KTR
Motif
Other DBs
NCBI-GeneID:
124265821
NCBI-ProteinID:
XP_046556614
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MASISTPGKIPVPHEDITCRLCQQPFSSPKLLTCLHSFCQLCIEERLTTEGGGHIFQCPL
CKHKTRLQTKSASSLTTNFYILGRQRVYASRTPQASNCVVCSMKGDFCETTHHCLDCGDK
LCETCSMRHNSSTLTATHRVVSLDDIRQGQYDKHFLEKEEQICDKHRETLSIFCHTCSEA
VCVHCAFAEHKKHQFDTVDEAADKRRESLKQALSMVGATSSSIQDSAKTLQAEMDQLNKE
EEIFVSELTSSVAAVMEKISEKSSEVLEKGRRSFEGERRRRQRMLELVYSESERREEVVR
VCQQVEEGGGLTLLLLSQTLQQGLKEYAEEPAVSSTGTLTTYKVNINLPVDAEVITFREV
PMAQGRTNVPCFCADSQVTPKSSIPKSLKEEPKIQTTHPTSTPQEWVMDTTANGDGGDQE
IGDKDASQSKDRAAKEFLEINLHGIDATEEGFYHTRVSSAHKLALINHNLILALLPLKIK
IDF
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaatatcgacacccggaaaaataccggtacctcatgaagacatcacctgtagg
ctgtgccaacagccgttctcctcccccaaacttttgacgtgtctccattcattctgtcag
ctttgtattgaagaacggcttactaccgagggcggtgggcatatcttccaatgtcctctg
tgcaagcataaaactcggctacagacgaaatcagcgagctctctaacgacaaacttctat
atactaggacgtcagagggtgtatgctagtcgcacaccacaggcctctaactgtgtggtt
tgttcaatgaaaggcgatttttgtgaaaccactcaccattgcctggattgtggcgacaaa
ctttgtgaaacatgctcaatgagacataactcttcaactcttacagcgacacatcgagtg
gtctcccttgatgacatcagacaaggtcagtacgataaacactttcttgagaaggaggaa
cagatttgtgacaaacaccgcgaaacattgagcattttctgtcacacatgttctgaggca
gtatgtgttcattgtgcctttgctgagcacaagaaacatcagtttgacactgtagacgaa
gcagctgacaaaaggcgtgagtcattgaaacaggcactgtcaatggtaggggcgacgtct
tccagtattcaagactctgccaaaacactgcaagcggagatggatcagttaaacaaagag
gaagaaatatttgtgagtgagctgacttcgtcagttgctgctgtgatggagaagatctca
gagaagagttctgaggtgttggagaagggcaggagaagttttgagggcgagaggaggagg
aggcaaaggatgctggagctggtgtactctgagtctgaaagaagggaggaggttgtccga
gtatgtcagcaggtggaagagggtggtgggctgactcttctgttgctgtcccagactctt
caacaggggctgaaagaatatgcagaggaacctgccgtgtcatctacaggtactctgact
acatataaggttaatataaaccttccagttgacgcagaagttatcacttttcgtgaagtt
ccaatggcccaaggaagaacaaatgtaccatgtttttgtgcagattcccaggttacaccg
aaatcttccatacccaaatcactcaaggaagaaccgaagatacaaaccacgcatcccacc
agcacaccacaggaatgggtaatggacacaacagccaacggtgatgggggtgatcaagag
attggagataaggatgcttcacagtctaaagacagggcagcaaaagaatttcttgagata
aaccttcacgggatagacgcaacagaggaagggttttatcatacaagagtcagttcagca
cacaaattagcactgataaatcacaacctaatattagctctattgcctttaaagataaag
atagacttttga
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integrated database retrieval system
