Haliotis rubra (blacklip abalone): 124267945
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Entry
124267945 CDS
T07967
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrj04121
]
124267945
Enzymes [BR:
hrj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124267945
Ubiquitin system [BR:
hrj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124267945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-B_box
zf-C3HC4_2
zf-RING_5
PEP-utilisers_N
DUF3086
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
124267945
NCBI-ProteinID:
XP_046558895
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MLHVLFQMATSQKLTEHYLTCIICSGVFSKPCTLVCNHTFCRKCIVNYTKTRPEAISAKS
LLCPFCSKMTKVSDPERPVEEWADDVKPIFLTQGLLDSFGPGSKDTTCCSYCKEEGETTP
ASVWCYVCDDALCGRCVRLHNRIPSARHHDVTDLSGEVKVKRRRMVMCKEHKDESVKLLC
KDCGKAVCQTCCTIYHRQCVSVVSLESEMQAMKTALTRATGNLSQRKEKIHKEIETKKSK
LEEETFRFKEMESHINSETVKAIEQIKLKERRLLDELKEMSDKYIGQMKADVKSGEMSVQ
MYQQQTELIDEALQSECDMDVYEMYQVCEADDVEAVGDADLKEGGIIASVTFRQDTDKLS
KALDDLQLGEIEVLYESVLDLKATPVLQDTIDVTVADDTRTALPYGVTVVVVGGRDTVVV
TDCNNKSVKSFYTSNNQPGHSKLLLDGGPCDITKLTHDQVAVTVPGTKQIVTVKVKPDLE
LLTTITTSKQYGGITSLTPSTLAAGSHSPPCVDILDMTGNVLRSISPHHKGNNILQYPDF
LSNTRTGNILVSDCRTKCVVCLTPEGDVVFSYSPTGDTSLEFPQGITSTRTGDILVTDYR
QHRVIHLTESCQFVQNLLTSKDCIQNPRGLCIDERGWLRVCLHKCAIQTFSCK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatgtcctctttcagatggctacctctcagaagctgacggaacattacttaacc
tgtatcatctgctccggcgtcttcagtaagccatgtacacttgtgtgtaatcacaccttc
tgtcggaaatgtatcgtcaactacaccaaaaccagaccagaagccatcagtgccaagtcc
ctcctctgtccattctgcagcaagatgacgaaagtgtccgaccctgagagacccgtggag
gagtgggcggatgacgtcaaacctatctttctcacccagggactcttggactcgtttggt
ccgggatctaaagatacaacctgctgcagctattgtaaagaggaaggggagacaactcct
gcctctgtttggtgctatgtgtgtgatgatgcgttatgtgggagatgcgtcagacttcac
aaccgcatcccatcagctcgtcaccacgatgtcactgacctgtctggggaggtcaaagtt
aaacgaaggcggatggtcatgtgtaaagaacacaaggatgaaagtgttaagttgttatgt
aaagattgcgggaaagcagtttgccaaacctgttgtaccatctaccacaggcaatgtgtc
tctgtggtcagcttggaatcagagatgcaggcaatgaaaacagcactgacgcgggcgacg
ggcaatttgtcacagagaaaggagaaaatccacaaagagatcgagacaaagaaatccaag
ctggaagaagaaacatttcgatttaaagaaatggaatcacatattaactctgaaactgtc
aaggcgatagaacagattaaactcaaggaacggagacttcttgatgaactgaaagagatg
tcagacaaatacatcggacaaatgaaagcagacgtaaaatctggtgagatgtcagtacag
atgtaccaacaacagacggagctcattgacgaggctctacaatcggaatgtgacatggat
gtgtatgagatgtatcaggtatgtgaggccgatgatgtggaggctgtcggagacgctgac
ctgaaggagggaggaataatagccagtgtcacattcagacaggacacagacaagctgagt
aaagcactggacgatctacagctgggtgagatagaggtcctgtatgagagtgtgctggac
ctgaaggctactcctgtgttacaagacaccattgacgtcacagtagcagacgatacacgt
acagcgctgccttatggagtgacagtggtggtggtgggtggtagagacacggttgtagtc
accgactgcaacaacaagagtgtgaagtccttctacaccagcaacaatcagccaggccac
agtaagctcctgcttgatggaggtccctgtgatatcacgaagttgacacacgatcaggta
gctgtcactgtgccaggcaccaaacagattgtaacagtaaaagtcaaaccagacctggag
ttactgacaaccatcacaaccagcaaacagtatgggggtataacgtccctgactccatca
acactagcagctggttcccactctcctccctgtgttgatatcttggatatgacaggaaac
gtgctgaggtctatcagtccacaccataaaggtaacaacatcttacagtatcccgacttc
ctcagtaatacgaggacaggtaacatcctggtgtctgactgtagaaccaagtgtgtcgtg
tgtctgacccccgagggagatgtggtgttcagctacagccctacaggagacacatcactg
gagtttcctcagggtatcacaagtaccagaacaggcgacatcctggttacagactacaga
caacacagagtcatccatctgactgagtcatgtcagtttgtacaaaatctgctgacatcc
aaggactgtattcagaatccacgtggactgtgtatagatgagagagggtggctacgtgtt
tgtcttcacaaatgtgccatacagacgttctcgtgtaaatag
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