Haliotis rubra (blacklip abalone): 124271959
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Entry
124271959 CDS
T07967
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
hrj
Haliotis rubra (blacklip abalone)
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrj03016
]
124271959
Enzymes [BR:
hrj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
124271959
Transfer RNA biogenesis [BR:
hrj03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
124271959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Flavodoxin_NdrI
KSHV_K8
Motif
Other DBs
NCBI-GeneID:
124271959
NCBI-ProteinID:
XP_046563086
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MLEKFLTSQVSEYLCIPVWTVLLATACLVWLLYSGSRGINVKKAVRDYATTDVAKDEAEK
PAEKTKSRKKLREKRKLKIFYGTQTGNAKKFAELLAADIGDKGYQTSTVDLKTYDPEDDL
SEETDHLCVFIISTYTDGKPPGGAEWFYKWLQETASDFRVQKTLLKGLHYAVFGLGNSVY
TENFNTVAKNVDSWLRDLSALRIESVGLGDENVANSENAGLEEDFQAWKRQFVKAARPVL
NGRTVKRCVGEKCGGKCACVKTKDTAEADGKTCSSEGECSSDNEVLFETSSEDEKVTSTS
KSTAGIVDLEDLGMMMKNVKKNKQVEVDEDEEGGVSSTEPREMITPLLRQSLEKQGYKLI
GSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKCVFCWRHHTNPVG
TEWKWKMDDADTVFQGALKNHVNLIKQFRGVPGVQPERFAEGLEPKHCALSLVGEPIMYP
EINKFVSLLHGRGISSFLVTNAQFPDAIKDLSPVTQLYVSVDASTKESLKKIDRPLFRDY
WQRFLDSLEALGSKGQRTVYRLTLVKAWNTDEVKNYASLVSRGKPDFIEVKGVTYCGESK
ASTLTMANVPWHQEVVSFVQQLADALPDYEIASEHEHSNCILIAHTKFKIKDEWWTWIDY
PRFHQLISEYNQSGGQKTFTAEDYMAPTPHWAVFGASERGFDPVETRFHRKKQKDISGC
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgctggagaagttcctgacaagccaggtgtcggagtacctgtgtatccccgtgtggacg
gtgctgctggccactgcctgtcttgtgtggctgctgtacagtggaagtagaggaatcaat
gtcaagaaagcagtgcgtgactatgccacaactgatgttgctaaagatgaagctgaaaaa
cctgctgagaagaccaaatcaagaaaaaagctgagggagaaacgaaaattgaagattttc
tatggaacacaaacaggcaacgcaaagaaatttgctgagctcttggctgcagatatagga
gacaaaggttatcaaacatcaactgttgatctcaagacctatgacccggaagatgacctc
tctgaagagaccgaccatttgtgtgtgtttattatctccacctacactgatggaaagcca
ccagggggcgctgagtggttctacaaatggctacaggaaaccgcctctgacttccgtgtc
cagaaaactctgctcaagggcctgcactatgctgtgttcggcctgggaaactcggtgtac
acagaaaactttaatacggtggccaagaatgtagactcatggttgagggatctttctgca
ctcagaattgaatctgttggactaggagatgaaaatgtggcaaacagtgaaaatgcagga
ttagaagaagacttccaggcgtggaagaggcagtttgtgaaggccgcgaggccggtgttg
aatggccgcaccgtgaagcggtgcgtgggagagaagtgtggaggcaaatgtgcgtgtgtc
aagacaaaagacacagcagaggctgatgggaagacatgcagcagcgagggagagtgcagc
agcgacaatgaggttttgtttgaaaccagtagtgaggacgagaaggtcactagtacgagc
aagtccacagcagggatcgttgatctggaggacctcggcatgatgatgaagaacgtcaag
aagaacaagcaggtggaggtggatgaggatgaggaggggggtgtgtcgtccacggagccg
agggagatgatcacgccgctcctgcgacagtcactggagaagcagggctacaagctgatt
ggttcacactcaggggtcaaactgtgcagatggacaaagtccatgctgcggggcagggga
ggctgctacaagcacacgttctacggtattgaatctcaccgctgcatggagaccacaccc
agtctggcctgtgccaacaagtgtgtcttctgctggagacatcacaccaatccagtgggc
acagagtggaagtggaagatggacgacgctgatactgtcttccagggagcgctcaagaac
catgtcaatctcattaagcagtttcggggtgttcctggagtgcagccagagaggtttgct
gaaggcctggagcccaaacactgcgcgctgtcactggtgggagaaccaatcatgtacccc
gagatcaacaagttcgtcagcctgctccatggcagggggatttcctccttcctcgtcacc
aacgcccagtttcctgatgcaatcaaggacctgagtccagtgacccagctgtatgtgagt
gtcgacgccagcaccaaggagagcctgaagaagatcgaccgcccgctgttccgggactac
tggcagcgtttcctggacagtctggaggccttgggcagcaaggggcagagaactgtgtac
agactgaccctggtcaaggcctggaacacagatgaagtgaagaactatgccagcctcgtc
tcccggggaaagccagacttcatcgaggtcaagggtgtcacctactgtggcgagtccaaa
gcttccaccctgacgatggccaacgtgccttggcaccaggaagttgttagcttcgtacaa
caacttgcagatgcgctgccagattacgaaatagcttccgaacatgaacactccaactgt
atactcatcgcacacacaaagttcaagatcaaggatgaatggtggacatggatagactat
cctcggtttcaccaactcatatcagaatacaaccaatcaggaggccagaaaacatttact
gcagaggactatatggccccaactccacactgggcagtgtttggagcttcagagagaggg
tttgacccagtagagactcggttccatagaaagaagcagaaagacatcagtggatgctaa
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