Helobdella robusta: HELRODRAFT_103917 Help Entry HELRODRAFT_103917 CDS       T03272                                  Name (RefSeq) hypothetical protein   KO K03006   DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] Organism hro  Helobdella robusta Pathway hro03020   RNA polymerase hro03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:hro00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     HELRODRAFT_103917   09124 Replication and repair    03420 Nucleotide excision repair     HELRODRAFT_103917  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:hro03021]     HELRODRAFT_103917    03400 DNA repair and recombination proteins [BR:hro03400]     HELRODRAFT_103917 Enzymes [BR:hro01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      HELRODRAFT_103917 Transcription machinery [BR:hro03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      HELRODRAFT_103917 DNA repair and recombination proteins [BR:hro03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       HELRODRAFT_103917 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_R NAM EutB Motif Other DBs NCBI-GeneID:  20194636 NCBI-ProteinID:  XP_009029713 JGI:  Helro1_103917 UniProt:  T1EDI4 LinkDB All DBs Position Unknown AA seq 1936 aa AA seqDB search MQFGILSPDEILRMSVTDDGGIKYPETTEGGRPKLGGLMDPRQGVVDRTSRCLTCAGNMA ECPGHFGHIELSKPVFHVPFITKIIKILRCVCYYCSRLLVDPNHPKVKEILIKTKGQLRR RQGYVYDLCKVKNVCDGGEVDKKDDDADPDKENRKVMGCGRNQPKIRRIGLELTAEWKHV NDDNQEKKIALTAERVLEIFKAISDETCIILGMDHRFARPDWMVATILPVPPLPVRPAVV MFGSARNQDDLTHKLADIIKINNQLKRNEQNGAAAHILAEDTKMLQFHVATMVDNEMPGL PRATQKSGRPLKSIKQRLKGKEGRIRGNLMGKRVDFSGRTVITPDPMLRIDQVGVPRSIA QNLTYPEIVTPFNIDRMTELVNRGANQYPGAKYILRENGDRIDLRYHPKSSDLHLQYGYK VERHMQDNDYIIFNRQPTLHKMSMMCHKVKILPWSTFRLNLSVTTPYNADFDGDEMNLHL AQSLETRAEISQLASVSRMIITPQANRPVMGIVQDSLTAVNKMTRRDTFICKEDMMNILM YLPRWDGKMPQPAIVRPKALWTGKQLFSLIIPGRINVIRTHSTHPDDEDRGSYQWISPGD TKVLVEDGKLLSGILCKKSLGASGGSLQHIIYHELGYEATAEFYSNIQMVTNQWLLIEGH TIGIADTIADSKTYSDIQSAIKKAKTDVVEVIEKAHNDELEPTPGNTLRQTFENQVNRIL NDARDKTGSLAQKSLSEFNNFKSMVVAGSKGNKINISQVIACVGQQNVEGKRIPFGFRHR TLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLI KAMESVMVKYDGTIRNQIEQLIQLRYGEDGLAGEWVEFQNLPSLKPSDKGFERGFKFDPT NEKHLKHYLNEDVLKKLSGDANVIAEVEKEYEQLLEDRIAVRQIFPSGDSKIVLPCNLQR LIWNAQKIFRIHSRKPSNLHPVKIIQDVRELSKKFMIVKGEDRLSKAANTNATLLMNILV RSTLCSKKVIEEFHLSSEAFEWLIGEIETKFIQAQVQPGEMVGALAAQSLGEPATQMTLN TFHYAGVSAKNVTLGVPRLKEIINVSKKPRTPSLTVFLTGQPARDAEKAKDVLCQLEHTT LRKVTANTAIYYDPDPMHTVIDEDQEWVSIYYDMPDIDISRLSPWLLRIELDRKRMTDKK LTMEQISEKITSGFGDDLNCIFNDDNAEKLVLRIRLMNNQDSKQGDMEEQIDKMPDDTFL KHIESNMLTDMTLQGITTISKVYMQQPTTDDKKRIIIDEKGEFKALQDWILETDGTALRK VLSVENVDPVRTVTNDIVEVFEVLGIEAVRKAIEREMNNVISFDGSYVNYRHLALLCDVM TAKGHLMAITRHGINRQETGALARCSFEETVDILVEAAAHAEMDPMKGVSEAIMLGQLAR IGTGCFDMMLDADKCKYGLEIPTNVSANALAGRDIFGLTSMTPGGATLLGSPQMTPWGQQ SGATPSYNSYSPVSGMTPGTCAGFSPIDRGYSPLHSPGWSPVPGSPGSPALTSPYIPSPT GPLSPTYSPDSPSYMPTSPALMQAQSPGGYSSRSPVYSSGSHGYSPTSPSYSPTSPSYSP TSPSYSPTSPSYSPTSPSYSPTSPSRSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPCYLPT SPSFSPTSPNYSPTSPSYVPTSPSYSPTSPAFPPSSPNYSPSSPNYSHTSPQYSPGSPNY SPSSPASPNYSPTSPSYSPSSPNYSVKSPGFSTAYSPSSPQYSPTSPAYCPTSPRYSPTS PGYTPSSPAFPSSSPNYAPSSPTYSPTSPMFGGGDDRSPMTPGSPALDSDDDEEMKDPAN DNDVEDDDDDEDMVEA NT seq 5811 nt NT seq  +upstreamnt  +downstreamnt atgcagttcggcattttgagtccagatgagattcttcgaatgtcagtgactgacgatggt ggaataaaatatcctgaaacaacagaagggggacgccccaaattaggtgggctgatggac ccccgacaaggtgtggtcgacagaacatcaagatgtctgacctgtgctggaaacatggct gaatgccctggtcactttggtcatattgaactttcaaaaccagttttccatgtaccattc ataacaaagatcataaaaattttaagatgtgtctgctattattgttctagattgcttgtt gatccaaaccacccaaaggtgaaagaaatattaattaaaaccaaaggtcaactaagaaga aggcagggttatgtatatgacctctgtaaagtcaagaacgtctgtgatggtggggaggta gataagaaggatgatgatgctgaccctgataaggaaaacagaaaggtcatggggtgcggt cgcaatcagccaaagataagaaggatcggcctggagttaacagctgaatggaagcatgtt aatgatgataaccaagaaaaaaaaattgctctgacagctgaacgtgttcttgaaatattc aaggccatctctgatgagacatgcatcattttaggcatggaccacaggttcgctcgtcct gattggatggttgcaactatcttgcccgtgccccctctgcccgtcaggccggccgttgtc atgtttggctctgccaggaatcaggacgacttgacacacaaactggccgacataattaag attaacaaccaattgaaacgcaatgagcaaaatggagcagcggctcacattttagcagaa gacacaaagatgcttcagttccacgtcgccactatggttgataacgagatgcctggtctg cctagggcgacacagaaatcgggtcgtccattgaagtccatcaaacagcgtttgaagggc aaggaagggcgaatccgtggtaaccttatggggaagagggtggatttttcaggtaggacc gtcatcaccccagatcccatgttaagaattgatcaggtcggcgttcctagatcaatagcc cagaacctcacctatccggagattgtcactccatttaatatcgacaggatgactgagtta gtgaacaggggtgccaaccagtaccccggggccaagtacattctaagggagaatggcgat cgtattgatctaaggtaccatcctaaatcatctgatcttcatcttcagtatggatacaag gttgagcgacacatgcaagacaacgactacataatcttcaatcgtcaaccaaccctacac aaaatgtctatgatgtgtcacaaagtcaagattctcccctggtctacattcagactcaat ctaagtgtcacgactccatacaatgctgattttgatggtgatgaaatgaatctccatctg gcacagtccctggagacgagagccgagattagtcagctggcctcggtgtcgaggatgatc atcaccccacaggccaacaggcccgtcatgggtatcgtgcaggactccttgactgccgtt aataagatgaccaggagagatactttcatttgcaaggaagacatgatgaacatcctgatg taccttccaaggtgggatgggaaaatgccgcagccggccatcgtgagacccaaagccctc tggacagggaaacagctcttctcactgatcattcccggtcgaataaatgttattcgtact catagtacccaccccgacgacgaggataggggctcttatcagtggatatcccctggggat acgaaggtactggttgaggatgggaagttgctcagcggtatactgtgtaaaaaatcgctg ggtgccagtggaggatccctacagcatatcatctatcatgagctgggttatgaagccaca gctgaattctactccaacattcaaatggtcaccaaccagtggctcttaattgaagggcac accattggaattgcggacacaattgcagactccaagacctattctgatatccaatcagct atcaagaaagccaaaactgatgtggtggaagtcatcgagaaagctcacaatgatgaactt gaaccgacgcctggaaatacactcagacaaacttttgaaaatcaggtcaatcgtatcttg aatgacgccagagacaagacaggtagtttggctcagaagtccctatctgagttcaacaac ttcaagtccatggtcgttgctgggtcgaagggcaacaagatcaacatttcacaagtcata gcctgtgtagggcagcagaatgtcgagggcaaacgtatcccctttggctttcgacacagg actctccctcatttcatcaaagacgattacggtcctgagagtcgaggttttgttgagaat tcttacctggctggtcttacacctacagaatttttcttccacgccatgggaggtagggag gggttgatcgatacggccgtcaaaactgctgaaactgggtacatccaacgtcgtctcata aaggctatggagagtgtcatggtgaaatacgatggtacgattaggaatcagatcgaacaa ctcattcaattgcgctacggagaggacgggctggctggtgagtgggtagaatttcaaaat cttccctctctcaaaccatctgataagggcttcgagagagggttcaaattcgacccgacc aatgagaagcatttaaagcattacttaaacgaagatgtcttaaagaagttgagtggggat gccaatgtcattgcagaagttgagaaagaatacgaacagctgctcgaagatcgtattgca gttaggcagattttcccctctggcgatagtaagattgtccttccgtgcaatctacaacgc ctgatttggaatgcccagaagatttttcgcatacattccaggaaaccatccaatcttcac cctgtcaaaattattcaagacgtgcgtgaacttagcaagaagttcatgatagtaaaaggt gaggacagactgagtaaggctgccaatacaaacgccactctactcatgaacatactggtc agatctactctttgctctaagaaggtcatcgaagaattccatctatcctcagaggcattt gagtggctgatcggggaaatagaaacaaagtttatacaagcccaggttcagcccggtgag atggtcggggccctggctgcccaatccctcggagaacccgccacacaaatgacccttaac actttccactacgccggagtgtctgctaagaatgtaactctgggtgtacccagactcaag gagattataaatgtttccaaaaagcccaggactccgtctctgactgtcttcctgacggga cagcctgctagagatgctgagaaagctaaggatgttctctgccagttggagcatacaacg cttcggaaggtgacagccaacactgccatctattacgatccagaccccatgcatactgtc atagatgaggaccaggaatgggtgagtatctattacgacatgcctgatattgacatatcc cgcttgtctccctggctattgagaatcgaactggataggaagaggatgaccgataaaaag ttgaccatggagcaaatatctgaaaagatcacatccggctttggggacgatttgaattgc atctttaacgatgacaatgcagaaaaattagtgctaaggattaggctaatgaataatcag gatagcaagcaaggagatatggaagaacaaatcgacaagatgcctgacgacacattccta aaacacatcgagtcaaacatgctgactgatatgacattacaaggaattaccactatttct aaagtgtacatgcaacagccaactactgatgataagaaacgtataatcattgatgagaaa ggtgagttcaaggccctacaggattggatacttgaaactgatggcactgcccttcgtaag gtcctgtcagtcgagaatgttgacccagttaggacggtgaccaatgatatcgtagaggtc tttgaggttctcgggatagaagcggtacgaaaggccatagagcgtgagatgaacaacgtc atctccttcgatggctcctacgtcaattacagacatctcgctcttctctgtgacgtcatg acggccaagggtcatctgatggccataactcgacatggcatcaacaggcaggaaactgga gcactggctcgttgctcctttgaggaaacggttgacattttagtggaggcagcagcccac gctgagatggatccaatgaaaggcgtgtcagaagccatcatgcttggacagctggccagg attggaactggttgttttgacatgatgctggatgctgacaagtgcaaatatggattggaa atcccgacaaatgtttcagccaatgctctggctggcagggacatcttcggcctaacatca atgactccgggtggagctacccttttgggctcccctcaaatgaccccctggggtcagcag agcggtgccaccccctcctacaactcctactcgccagttagcggaatgacgcctggaacg tgtgccgggttttctccaatcgatcgcggatacagtcccttgcatagtccaggatggtct cctgttcccggatcacctggatctccagcactgacgagcccttatattccgagtcccact ggacccctctcgccaacctacagtccggattctccgtcgtacatgccgacgtcgcccgcc ttgatgcaggcacaaagtcccggcggatacagcagcagaagtcctgtctactcatctgga agccatggatactcgccaacgtcaccctcgtattcgccaacgtcgccctcctattcgcca acgtcaccctcctattcacctacttcgcccagttattcgccgacttcacctagttactct cccacttcaccatctcgctcgccggcctcgccatcctactcgccaacctcaccatcctac tccccgacgtcaccgtcatactcaccaacgtctccatcatattctccgacatcacccagt tactcaccgacctcaccaagttattcaccaacgtcgccatcttactcaccgacctcacca tcttactcaccgacttcaccatcttactcaccaacctcaccatcctactcaccaacgtca ccatcctactcaccaacgtcaccatcatattcaccaacatcaccgtgctacctgccaacg tcaccatcattctcgccaacatcaccaaactacagtccgactagcccaagttacgtacca acttcaccatcctactcgccaacatcaccagcttttccgccctcatccccaaattattct ccctcatccccaaattactcgcacactagtccacagtactcacctggatcaccaaactac agcccatcgtcaccagcgtctccaaattactcgccaacttcaccatcctactcgccgtca tctcctaattattccgtgaagagccccggatttagtacggcctacagcccatcaagtccc cagtacagtcccacaagtccggcttactgtccgacaagtcctagatactcgcccacatca ccgggttataccccgagttccccagctttcccgtcgtcgtcaccaaattatgcaccatca tcaccgacgtactcgccaacgagtccaatgtttggaggcggtgatgatagatcgcccatg actccaggcagtccggcgcttgattccgacgatgacgaagagatgaaggatcctgccaat gataacgatgtcgaagatgatgacgacgatgaagatatggtagaagcttga

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