KEGG   Helobdella robusta: HELRODRAFT_193731
Entry
HELRODRAFT_193731 CDS       T03272                                 
Name
(RefSeq) hypothetical protein
  KO
K26109  nuclear exosome regulator NRDE2
Organism
hro  Helobdella robusta
Brite
KEGG Orthology (KO) [BR:hro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hro03019]
    HELRODRAFT_193731
Messenger RNA biogenesis [BR:hro03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     HELRODRAFT_193731
SSDB
Motif
Pfam: NRDE-2
Other DBs
NCBI-GeneID: 20212755
NCBI-ProteinID: XP_009026943
JGI: Helro1_193731
UniProt: T1FVA9
LinkDB
Position
Unknown
AA seq 1215 aa
MSLFPCFDELQQRKESAVHSDKNSNESCSKTGEVWCATTSNIATHRDGGHKNGGGDGGGG
KSGAFRKNIDHKKKKEKKRQKMLSDDSSDYDDDDGGDPPNKRHKNSKIAGGMNESQSKSS
SLDRLPISLSPIPSSSSSSSKPALSSERQSSQLTDDEHEFFIDVKPDRENTLYEGNYRVP
TYKNIFNLHDHHTSPSTNNNSKSETNERYFSVARQLKQLNISKGLDAVVLPPSSSTSTSS
PSSTIKMELAHKHDSAGATSTTNINTNNHSADDATIELQTRSFNEKLRKDPRNSQLWIEF
VHFQDKKFMHDMNLSTLNARSNNDLQLLSDIKLSILDEAIKYHPHHHKLILLRQQIRESA
WSKEDVISSWNQLINTHERDAKLWSSYIRYMKSKMKSFDEVLDAYKKCFTHLKHTGQVTQ
LINLLREASNFIMQAGQSELSISVYQLLIDMNLTAPKSIKSLSLDDQLDFLNAYWSAGAA
RLGEPHWVGWGVWVDKRGEVQQQQQIGIHGKSEEEVELEILSANQNNRPTCWSQLELSRS
RRHWFPWRPTNDEDECEDDERMVTFDDLTQFLFKIKTNKRNDDGDDGVGGESHEENDDDY
NMFILFIDFLNMMMKRSGRYDGDEAECNDECDEDDDDAAAADDDYLKNILLSGDVIKRHN
HLTKLNFKLDRESDNDEDVDDDNNAEGGYNGEGFENVDDMIENLMLLGTKQFKNEFKRIF
LHKYVYYKFNSLKIRGTAEKDCRKFFKSLLKENSDDVLLWMKYASFEYSCGNVELAWKVI
STTRASNYNNSCKIVLERYNFDFISGYMEESAPKYKVGSSGVKTRPGVNTNLKAADVNAE
KVVESLSWVLATSTSTGINSTLSDSLATLTKSDEKLCNNISRTSSTLLNIVEDAIVNMNV
NANRNNNSNNKIHLSSYCLHHLGHDLLHLVHLLVRFIAITADIQVAVQIHDRVLDFLLHQ
TPANTATNDSNNNSRTTNDRGNDSNSKKKISSYDNMLQKFKSSLARYMIYDLWELINFYL
SNHFLQQTLLIATATKHLKLFPKSLNIIRNYMMHRNENNVMACINDGLDISDLLYGGRPL
LALRVAYLASLFSLYCRNNGRKSAENRMINFMTFCMNDEQTAKSSMLWYLCFLIQASVSK
GKMIDIFYRATEHHPFLKKLYMLAIRYIPEKFVTIATLMANKKIRVRTYTEEVDLLMKCF
QIVSASKQMNAGDDN
NT seq 3648 nt   +upstreamnt  +downstreamnt
atgtcactttttccctgttttgatgagcttcagcaaaggaaggaatcggctgtgcacagt
gacaaaaattccaatgaaagttgtagcaagactggtgaggtgtggtgtgctacaacaagc
aacattgccactcatcgtgatggtggtcataaaaatggcggcggtgatgggggtgggggt
aaaagtggggctttcagaaaaaacatagatcataaaaagaagaaagaaaaaaagaggcag
aagatgttgtcagacgatagtagcgattatgatgatgatgatggtggagaccctcctaac
aaaaggcacaaaaactcaaaaatagctggtggaatgaatgaatctcaaagcaaatcatct
tcactagatagattacccatctcattatcaccaataccatcatcatcgtcgtcgtcatca
aaaccagctttgtcatcggaacgacagtcgtcacaactaaccgatgatgagcatgaattt
ttcattgatgtgaagcctgaccgagagaacacgttatatgagggcaactacagggtgcct
acgtacaagaacatcttcaacctgcatgatcaccatacatcaccgtcaaccaacaacaat
agcaaatcagaaaccaatgaaagatatttttcagtggctcgtcaactgaagcagttgaac
atttcaaagggtcttgatgcagttgttttgccaccatcttcatcaacatcaacatcatct
ccatcatctacaattaaaatggagctggctcacaaacatgattctgccggcgctaccagc
accactaacatcaacaccaacaaccacagcgcagatgacgccacaatagaacttcagact
agatcattcaatgaaaagttgaggaaggaccctagaaattcacaactctggattgagttt
gttcattttcaggacaagaaattcatgcacgatatgaatctgtcaacgttgaatgcacgc
tccaacaacgaccttcaacttttgagtgacatcaagctatccatcttagacgaggccatc
aaatatcatccgcaccatcacaaactcatcttacttagacagcaaataagagagtcagca
tggtcgaaagaggatgtgatatcaagttggaaccaactcattaatactcatgagagagat
gctaaactgtggagcagttacataagatacatgaagagcaaaatgaagagctttgacgaa
gtgctcgatgcttacaagaagtgtttcactcatttaaaacatactggacaagttactcaa
ctaattaatctgctgagagaagcctccaacttcatcatgcaagctggccaatcggaatta
agtatttccgtgtaccaactcttgattgatatgaatctgactgcgcccaaatcgataaag
tctctctcgttggatgaccaattggacttccttaatgcctattggtcggcaggcgctgcc
aggttaggagaaccacactgggttggttggggcgtatgggtggacaaaagaggagaagta
cagcagcagcaacagatcggcattcatgggaaaagtgaggaagaagttgaactagaaatt
ttatcagctaaccagaataatcgaccaacatgttggagccaattagaattaagtaggtca
cggcgtcattggtttccgtggagaccaaccaatgacgaagacgagtgtgaagatgatgaa
aggatggtaacttttgatgatctgacccaatttctattcaagattaaaacgaataaaaga
aacgacgatggtgatgacggagttggcggtgagagtcatgaggagaatgatgatgattac
aacatgttcatattgttcatcgactttctcaatatgatgatgaaacgttctggcagatat
gatggtgatgaggctgagtgcaacgatgaatgtgacgaagatgatgatgatgctgctgct
gccgatgatgactatttgaagaacatacttttaagtggtgacgtgataaagagacacaac
catttaacaaagctcaactttaaattggatcgtgagagtgataatgatgaagatgttgat
gatgataacaatgctgagggtggttacaatggtgagggctttgaaaatgttgacgatatg
attgaaaacctcatgcttctgggaacgaaacagtttaaaaatgaatttaaacgaatattc
ttgcacaagtatgtctattacaaattcaactcactgaagatcagaggcacagctgaaaag
gattgcagaaagttctttaaaagtctgttgaaggaaaattcagatgatgtcttattgtgg
atgaagtacgcaagttttgaatattcatgtggcaatgtagagctggcatggaaagtcatc
agcacaacacgggctagtaattataataattcatgcaaaattgtacttgaaagatacaac
tttgattttattagtggatatatggaagagtctgctcctaaatataaggttggttcgagt
ggtgtgaaaaccaggccaggtgtgaatacaaatttgaaagctgctgatgtcaacgctgag
aaggttgttgaaagtttaagttgggtgctggcaacatcgacgtcgacaggcatcaacagc
acgttgtctgattcacttgcaacgctcacaaaatctgatgaaaaattgtgcaacaacatc
agcagaacttcatcaacattgttgaacattgttgaagatgccatcgtcaacatgaatgtt
aatgccaatagaaataataatagtaataataaaattcacctgtcttcgtactgcctccac
catctaggacacgacctcctccatcttgtccacctgctcgttcgattcatcgccataact
gccgacatccaagttgccgttcaaatccatgatcgcgttcttgattttctactccaccag
actcctgctaatactgctactaatgattctaacaacaacagcagaactaccaacgaccga
ggaaatgattccaacagcaagaagaaaattagttcatatgacaacatgcttcagaaattc
aagtccagtcttgcccgctacatgatttatgatctttgggaactcataaatttttacctc
agtaaccactttttgcaacagacgctactcatcgccacggcaaccaaacatttgaaatta
tttccaaagagtctgaatataatccgcaattacatgatgcatagaaacgaaaataatgtg
atggcgtgcattaatgatggcctggatatttctgatttgttgtacggaggacgaccactg
ctcgccctccgtgtggcttacctggcctcgctgttcagtctctattgcagaaataatggc
aggaaatcagcagagaatcgaatgattaatttcatgaccttttgtatgaacgatgaacaa
acagccaagtcctcgatgctctggtatctttgcttcttaatccaggccagtgtgagcaaa
ggcaaaatgattgacatcttctacagagccactgagcaccatccattcctgaagaagctc
tacatgttggcgatccggtacatccctgaaaagttcgtcaccatagcaactcttatggcc
aataagaagatccgagtgagaacgtacacggaggaagttgatttgctgatgaagtgcttt
caaatcgtgtcagccagcaaacaaatgaacgctggtgacgataattaa

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