Helobdella robusta: HELRODRAFT_193731
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Entry
HELRODRAFT_193731 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K26109
nuclear exosome regulator NRDE2
Organism
hro
Helobdella robusta
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_193731
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
HELRODRAFT_193731
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
Motif
Other DBs
NCBI-GeneID:
20212755
NCBI-ProteinID:
XP_009026943
JGI:
Helro1_193731
UniProt:
T1FVA9
LinkDB
All DBs
Position
Unknown
AA seq
1215 aa
AA seq
DB search
MSLFPCFDELQQRKESAVHSDKNSNESCSKTGEVWCATTSNIATHRDGGHKNGGGDGGGG
KSGAFRKNIDHKKKKEKKRQKMLSDDSSDYDDDDGGDPPNKRHKNSKIAGGMNESQSKSS
SLDRLPISLSPIPSSSSSSSKPALSSERQSSQLTDDEHEFFIDVKPDRENTLYEGNYRVP
TYKNIFNLHDHHTSPSTNNNSKSETNERYFSVARQLKQLNISKGLDAVVLPPSSSTSTSS
PSSTIKMELAHKHDSAGATSTTNINTNNHSADDATIELQTRSFNEKLRKDPRNSQLWIEF
VHFQDKKFMHDMNLSTLNARSNNDLQLLSDIKLSILDEAIKYHPHHHKLILLRQQIRESA
WSKEDVISSWNQLINTHERDAKLWSSYIRYMKSKMKSFDEVLDAYKKCFTHLKHTGQVTQ
LINLLREASNFIMQAGQSELSISVYQLLIDMNLTAPKSIKSLSLDDQLDFLNAYWSAGAA
RLGEPHWVGWGVWVDKRGEVQQQQQIGIHGKSEEEVELEILSANQNNRPTCWSQLELSRS
RRHWFPWRPTNDEDECEDDERMVTFDDLTQFLFKIKTNKRNDDGDDGVGGESHEENDDDY
NMFILFIDFLNMMMKRSGRYDGDEAECNDECDEDDDDAAAADDDYLKNILLSGDVIKRHN
HLTKLNFKLDRESDNDEDVDDDNNAEGGYNGEGFENVDDMIENLMLLGTKQFKNEFKRIF
LHKYVYYKFNSLKIRGTAEKDCRKFFKSLLKENSDDVLLWMKYASFEYSCGNVELAWKVI
STTRASNYNNSCKIVLERYNFDFISGYMEESAPKYKVGSSGVKTRPGVNTNLKAADVNAE
KVVESLSWVLATSTSTGINSTLSDSLATLTKSDEKLCNNISRTSSTLLNIVEDAIVNMNV
NANRNNNSNNKIHLSSYCLHHLGHDLLHLVHLLVRFIAITADIQVAVQIHDRVLDFLLHQ
TPANTATNDSNNNSRTTNDRGNDSNSKKKISSYDNMLQKFKSSLARYMIYDLWELINFYL
SNHFLQQTLLIATATKHLKLFPKSLNIIRNYMMHRNENNVMACINDGLDISDLLYGGRPL
LALRVAYLASLFSLYCRNNGRKSAENRMINFMTFCMNDEQTAKSSMLWYLCFLIQASVSK
GKMIDIFYRATEHHPFLKKLYMLAIRYIPEKFVTIATLMANKKIRVRTYTEEVDLLMKCF
QIVSASKQMNAGDDN
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtcactttttccctgttttgatgagcttcagcaaaggaaggaatcggctgtgcacagt
gacaaaaattccaatgaaagttgtagcaagactggtgaggtgtggtgtgctacaacaagc
aacattgccactcatcgtgatggtggtcataaaaatggcggcggtgatgggggtgggggt
aaaagtggggctttcagaaaaaacatagatcataaaaagaagaaagaaaaaaagaggcag
aagatgttgtcagacgatagtagcgattatgatgatgatgatggtggagaccctcctaac
aaaaggcacaaaaactcaaaaatagctggtggaatgaatgaatctcaaagcaaatcatct
tcactagatagattacccatctcattatcaccaataccatcatcatcgtcgtcgtcatca
aaaccagctttgtcatcggaacgacagtcgtcacaactaaccgatgatgagcatgaattt
ttcattgatgtgaagcctgaccgagagaacacgttatatgagggcaactacagggtgcct
acgtacaagaacatcttcaacctgcatgatcaccatacatcaccgtcaaccaacaacaat
agcaaatcagaaaccaatgaaagatatttttcagtggctcgtcaactgaagcagttgaac
atttcaaagggtcttgatgcagttgttttgccaccatcttcatcaacatcaacatcatct
ccatcatctacaattaaaatggagctggctcacaaacatgattctgccggcgctaccagc
accactaacatcaacaccaacaaccacagcgcagatgacgccacaatagaacttcagact
agatcattcaatgaaaagttgaggaaggaccctagaaattcacaactctggattgagttt
gttcattttcaggacaagaaattcatgcacgatatgaatctgtcaacgttgaatgcacgc
tccaacaacgaccttcaacttttgagtgacatcaagctatccatcttagacgaggccatc
aaatatcatccgcaccatcacaaactcatcttacttagacagcaaataagagagtcagca
tggtcgaaagaggatgtgatatcaagttggaaccaactcattaatactcatgagagagat
gctaaactgtggagcagttacataagatacatgaagagcaaaatgaagagctttgacgaa
gtgctcgatgcttacaagaagtgtttcactcatttaaaacatactggacaagttactcaa
ctaattaatctgctgagagaagcctccaacttcatcatgcaagctggccaatcggaatta
agtatttccgtgtaccaactcttgattgatatgaatctgactgcgcccaaatcgataaag
tctctctcgttggatgaccaattggacttccttaatgcctattggtcggcaggcgctgcc
aggttaggagaaccacactgggttggttggggcgtatgggtggacaaaagaggagaagta
cagcagcagcaacagatcggcattcatgggaaaagtgaggaagaagttgaactagaaatt
ttatcagctaaccagaataatcgaccaacatgttggagccaattagaattaagtaggtca
cggcgtcattggtttccgtggagaccaaccaatgacgaagacgagtgtgaagatgatgaa
aggatggtaacttttgatgatctgacccaatttctattcaagattaaaacgaataaaaga
aacgacgatggtgatgacggagttggcggtgagagtcatgaggagaatgatgatgattac
aacatgttcatattgttcatcgactttctcaatatgatgatgaaacgttctggcagatat
gatggtgatgaggctgagtgcaacgatgaatgtgacgaagatgatgatgatgctgctgct
gccgatgatgactatttgaagaacatacttttaagtggtgacgtgataaagagacacaac
catttaacaaagctcaactttaaattggatcgtgagagtgataatgatgaagatgttgat
gatgataacaatgctgagggtggttacaatggtgagggctttgaaaatgttgacgatatg
attgaaaacctcatgcttctgggaacgaaacagtttaaaaatgaatttaaacgaatattc
ttgcacaagtatgtctattacaaattcaactcactgaagatcagaggcacagctgaaaag
gattgcagaaagttctttaaaagtctgttgaaggaaaattcagatgatgtcttattgtgg
atgaagtacgcaagttttgaatattcatgtggcaatgtagagctggcatggaaagtcatc
agcacaacacgggctagtaattataataattcatgcaaaattgtacttgaaagatacaac
tttgattttattagtggatatatggaagagtctgctcctaaatataaggttggttcgagt
ggtgtgaaaaccaggccaggtgtgaatacaaatttgaaagctgctgatgtcaacgctgag
aaggttgttgaaagtttaagttgggtgctggcaacatcgacgtcgacaggcatcaacagc
acgttgtctgattcacttgcaacgctcacaaaatctgatgaaaaattgtgcaacaacatc
agcagaacttcatcaacattgttgaacattgttgaagatgccatcgtcaacatgaatgtt
aatgccaatagaaataataatagtaataataaaattcacctgtcttcgtactgcctccac
catctaggacacgacctcctccatcttgtccacctgctcgttcgattcatcgccataact
gccgacatccaagttgccgttcaaatccatgatcgcgttcttgattttctactccaccag
actcctgctaatactgctactaatgattctaacaacaacagcagaactaccaacgaccga
ggaaatgattccaacagcaagaagaaaattagttcatatgacaacatgcttcagaaattc
aagtccagtcttgcccgctacatgatttatgatctttgggaactcataaatttttacctc
agtaaccactttttgcaacagacgctactcatcgccacggcaaccaaacatttgaaatta
tttccaaagagtctgaatataatccgcaattacatgatgcatagaaacgaaaataatgtg
atggcgtgcattaatgatggcctggatatttctgatttgttgtacggaggacgaccactg
ctcgccctccgtgtggcttacctggcctcgctgttcagtctctattgcagaaataatggc
aggaaatcagcagagaatcgaatgattaatttcatgaccttttgtatgaacgatgaacaa
acagccaagtcctcgatgctctggtatctttgcttcttaatccaggccagtgtgagcaaa
ggcaaaatgattgacatcttctacagagccactgagcaccatccattcctgaagaagctc
tacatgttggcgatccggtacatccctgaaaagttcgtcaccatagcaactcttatggcc
aataagaagatccgagtgagaacgtacacggaggaagttgatttgctgatgaagtgcttt
caaatcgtgtcagccagcaaacaaatgaacgctggtgacgataattaa
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