Helobdella robusta: HELRODRAFT_194608
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Entry
HELRODRAFT_194608 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
hro
Helobdella robusta
Pathway
hro00280
Valine, leucine and isoleucine degradation
hro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HELRODRAFT_194608
Enzymes [BR:
hro01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
HELRODRAFT_194608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
HlyD_3
RimK
HlyD_D23
ATP-grasp_3
ATPgrasp_ST
Biotin_lipoyl_2
DUF2118
GARS_A
DUF3446
Motif
Other DBs
NCBI-GeneID:
20213083
NCBI-ProteinID:
XP_009030965
JGI:
Helro1_194608
UniProt:
T1FW87
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All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MAYFNVLDLPHHQIDLIHSMHSFHLLVNIFTQILIANRSEIACRVMRTAHKMGIQSVAVY
SDADRSSLFVQEADEAYHIGGAASLDSYLKMDKVIQVAKRSGAQAIHPGYGFLSESMEFA
ELCQKEGLIFIGPPSSAIRDMGIKRWVGGLVLKRGMHRIQVFQIRPGPDLAGFKIQKPAG
AGFNTSKHIMSSAGVPIIEGYHGDDQSEERLLKEAERIGFPVMIKAVRGGGGKGMRIALN
GQEFLPQLESARNEAYKAYKDTVVLIEKYVQCPRHVEVQIFGDMHDNYVYLFERDCSVQR
RHQKVIEEAPAPHISEATRKRLGEAACRAARAVKYVGAGTVEFIMDREENFYFMEMNTRL
QVEHPVTEMVTGTDLVQWQIMSSSSSSSPPSSSSSSSPDEFSPFVMIQGVRMNHENTRRI
VLNDGVKDIQMSVTFKGDDNYEVKFNDLTYKARASLDESRPNKIVLEFSLDGYVSRSNAV
MNKDVLHFFSNSGSHQMKLVAPLFVAASNATSSEATGHSGARSPMPGVVDKIFVRGGQRV
EEGQPVAVIIAMKMEYVIRAPKTGVVEEVIFQVGDTVKKNAELVHIKEE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcctattttaacgttttagacttgcctcatcatcaaatagacctcattcattccatg
cactccttccatctgcttgtaaatatcttcactcagatcttgatagccaatcgtagcgag
attgcatgtcgggttatgaggaccgcccacaaaatgggcatccaatcagtggctgtgtac
agtgatgctgatagaagttcactttttgtacaggaagcagatgaggcgtatcacattggt
ggggcagcgtccctcgacagctacctgaaaatggacaaggtcatccaagttgccaaaagg
tcaggggctcaggcgatccatccaggatatggcttcctgtcggagagcatggaatttgcg
gaactctgccagaaagagggcctcatctttattggacctccctcttctgccatcagagat
atgggtatcaagaggtgggtgggtgggttggttttgaagagagggatgcaccggattcag
gtttttcaaattcgaccgggaccggacttggccggatttaaaattcaaaaaccggccggg
gccggatttaacacgtcaaagcacatcatgtcatcggctggagtgccaatcatcgaaggg
taccacggtgacgaccaatcagaggagagattgttgaaggaggcggagcgaatcgggttc
cctgtcatgatcaaagctgtcagaggtggcggaggaaagggcatgaggatagccctgaac
ggtcaagagttcttgccccaacttgaatctgcccgaaacgaggcctacaaagcctacaaa
gacaccgttgttctcattgaaaaatatgtccagtgtccgagacacgttgaggttcagatc
tttggcgacatgcacgacaactacgtgtacctgttcgagagggactgcagcgtccagagg
aggcatcagaaggtcatcgaggaagctcctgctccacacatatcagaagcgacccgcaag
cgactcggtgaagctgcttgcagagctgccagggctgttaaatacgttggagctggaact
gtggagttcattatggatcgtgaagaaaatttttatttcatggagatgaacacgagatta
caagttgaacatccggtcactgagatggtcacggggactgatcttgtccaatggcagatt
atgtcctcatcatcgtcatcatcaccaccatcatcatcatcttcttcatcaccagatgag
ttctcgccgttcgtaatgatacagggggtgaggatgaaccacgagaacacgagaaggatc
gttcttaatgacggggttaaagacattcagatgagcgtaaccttcaaaggcgacgataat
tacgaggtcaagttcaatgacttgacctacaaagctcgagcctcattagacgaaagccga
cctaataaaattgtactcgagttttcactggatggatacgtgtctaggagtaacgctgtc
atgaacaaagatgtgctgcacttcttcagcaatagcggcagccaccagatgaagttagtg
gccccattattcgtggcagcaagcaacgcgacctcgtcggaggccaccggccactctggt
gccaggtcgcccatgccaggtgtggtggacaagatatttgtgaggggcggtcagagggtg
gaagagggccagcctgttgccgtcatcatcgccatgaagatggagtacgtgataagagcc
ccgaagacaggtgtagtagaagaggttattttccaagtaggagacactgtcaagaagaac
gctgaactggtgcatatcaaggaggagtga
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