Helobdella robusta: HELRODRAFT_69505
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Entry
HELRODRAFT_69505 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
hro
Helobdella robusta
Pathway
hro03022
Basal transcription factors
hro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HELRODRAFT_69505
09124 Replication and repair
03420 Nucleotide excision repair
HELRODRAFT_69505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hro03021
]
HELRODRAFT_69505
03400 DNA repair and recombination proteins [BR:
hro03400
]
HELRODRAFT_69505
Transcription machinery [BR:
hro03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HELRODRAFT_69505
DNA repair and recombination proteins [BR:
hro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HELRODRAFT_69505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
SinI
Motif
Other DBs
NCBI-GeneID:
20214359
NCBI-ProteinID:
XP_009028836
JGI:
Helro1_69505
UniProt:
T1FZW1
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MASNLIQPVLKKFEFKDLRSYIKSLPQSTIVQLYNYPAACLAVFRELPELAKLFVMRLLF
LEQPVTKSVVLSWINTKHSSEKSKTLDVLKELYIFRESSQQPGLLAGYKLDDAFKKNLKV
VLCGGGGSWLGVGLQPDKYRKDIAFLDAYAKERWEYILHYMVRSQVVKNSNISRDVIDVL
TYAGLILEYVSSSSDPYITAAGFQFLLMDTPTQVWTFLLKYLERIESNESDLVECLSLLL
TINFLTLGKDYLTDKLSERQQIFLQHLREFGLVFQRKRKCQRFYPTRLAVNMISGSGNEV
TFDTHKQGYIIVETSYRVSAYTDSALQINLLALFCKIHYRFPNVVIGNITRESCREAFNM
GITAEQIIRFLQTHAHPEASRKKPAVPHTVTDQIMLWELERDRFRYAEGVMYSQFNAQSD
FDMLRDYAKQLDVLIWENAQTRMLMVT
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaacctgatacagccggtattgaaaaagtttgaattcaaagaccttcgtagt
tatataaagtcattgccacagtcgactattgttcagctctacaactatccggcagcatgt
ctggccgttttcagggaactgccagagttagcgaaactttttgtaatgaggcttttattc
ctggagcaaccagtcacaaagtcagtggtcttgtcttggatcaataccaaacattctagt
gagaagtcgaaaactctagacgtcctcaaggagttgtacatattcagggagtcttcgcaa
cagcctggcctactggctggctacaaactggacgatgccttcaagaaaaatctcaaagtt
gtcctctgcggagggggcgggtcatggttgggtgtaggtttgcagccagataagtaccgc
aaggatattgcattccttgatgcatatgctaaagagagatgggagtacatattacactac
atggttcgttcacaagttgtcaaaaattcaaacatcagccgagatgtcatcgacgtctta
acctacgccggactcatccttgagtatgtttcatctagttcggatccctacataacggcc
gccggcttccaattcctcctcatggacacgcccacccaagtttggaccttcctcctgaaa
tatctcgagaggattgagtcgaacgagagtgatttggtagagtgcttgtctctcctactg
acaatcaacttcctcacccttggaaaggattacttgacagataagttgtctgagaggcag
caaatcttcctccagcatctaagagagttcggtctcgtttttcagagaaagaggaaatgc
cagaggttctacccgacgcgtctggccgtgaacatgatatctgggtcaggtaatgaggtc
acgttcgacacgcacaaacagggttacatcattgtggagaccagctaccgagtgtcggcc
tacaccgactctgccctgcagattaaccttttggccctgttctgtaagatacattacagg
tttcccaatgtggttattggcaacataactcgagagagctgtagagaagccttcaacatg
ggcatcactgctgaacagataatcaggtttctacagacacacgcccaccctgaagctagc
agaaagaagccagctgtaccccacacagtcacagatcagatcatgttgtgggaacttgag
agggacaggttcaggtacgctgagggggtcatgtacagccagttcaatgctcaaagtgac
tttgacatgctaagggactatgctaagcagttggacgtgttgatctgggagaacgcgcag
acgaggatgctgatggtgacg
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integrated database retrieval system
