Hymenobacter sp. BT18: HER32_12125
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Entry
HER32_12125 CDS
T06970
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
hrs
Hymenobacter sp. BT18
Pathway
hrs00521
Streptomycin biosynthesis
hrs00523
Polyketide sugar unit biosynthesis
hrs00541
O-Antigen nucleotide sugar biosynthesis
hrs01100
Metabolic pathways
hrs01110
Biosynthesis of secondary metabolites
hrs01250
Biosynthesis of nucleotide sugars
Module
hrs_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HER32_12125 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HER32_12125 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HER32_12125 (rfbC)
Enzymes [BR:
hrs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HER32_12125 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QIX61888
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Position
2838846..2839388
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AA seq
180 aa
AA seq
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MEIKYHALAGIIELTPRLFTDARGSFFESFNARRFAEVGIEGDWVQDNQSLSSRGVLRGL
HFQRPPYAQAKLLRVASGRVLDVTVDLRRNSPTYGQHLSVELDAERCNMLYVPVGFAHGF
LTLADNTRFIYKCSDYYQPSAEGGLRWNDPTLGISWGLEEPVVSEKDEVLPFLRDFESPF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaagtatcacgctctggccggcataatcgaactaactccgcggctgtttacc
gatgcccgcggctcctttttcgaatcgtttaatgcccggcgctttgctgaggtcggcata
gaaggcgactgggtgcaggataaccagtccctctcgtcgcggggagtgttgcggggcctg
catttccagcgcccaccctacgcccaggccaagctcctgcgtgtggcctcaggccgcgtg
ctggacgtgacggtagacttgcgccgcaactcgcccacctacgggcagcacctgagcgtg
gagctggacgcggagcgctgcaatatgctgtacgtgcccgtcggctttgcccacggtttc
ctcaccctggccgacaacacccgcttcatctacaagtgcagtgactattatcagccttcc
gccgaaggtggcctgcgctggaacgaccccacgctgggcattagctggggcttggaggag
ccggtggtttccgagaaagacgaagtactgcccttcctgcgcgacttcgaaagcccgttt
taa
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