Hymenobacter sp. BT18: HER32_13160
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Entry
HER32_13160 CDS
T06970
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
hrs
Hymenobacter sp. BT18
Pathway
hrs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HER32_13160 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrs03400
]
HER32_13160 (uvrA)
DNA repair and recombination proteins [BR:
hrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HER32_13160 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HER32_13160 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
SMC_N
UvrA_DNA-bind
AAA_21
AAA_16
nSTAND1
AAA_29
RsgA_GTPase
AAA_22
DnaJ_CXXCXGXG
AAA_33
Viral_helicase1
AAA_18
nSTAND3
ATPase_2
cobW
FtsK_SpoIIIE
NACHT
Motif
Other DBs
NCBI-ProteinID:
QIX62083
LinkDB
All DBs
Position
3063567..3066401
Genome browser
AA seq
944 aa
AA seq
DB search
MASTTDLQVAAPAADPIDQLDPREFILIKNARVHNLKNLSVALPRNKFIVVTGLSGSGKS
SLAFDTLYAEGQRMYVESLSSYARQFLGRMDKPDVDYIRGISPAIAIEQKVSIKNNRSTV
GTSTEIYDYLKLLFARVGRTYSPVSGEQVKKDNVADVVDYLMQLPEGTRVTLLSPLLPSE
DGRPMSKELDLLLQKGYSRVVVNGETAFIEELIAEGQPEVQGDVFIMIDRTAIQPGDEDL
MFRLADSVQTAFFEGHGTCIVKMDEETRTFSDRFELDGLVFEEPSVNFFSFNNPYGACQT
CEGFGSVLGIDEDLVIPDKSLTVYEGAIAPWRTDKQSEWLKPLLKNGIRFDFPIHRPYNE
LSEAERNLLWKGNKYFDGLDKYFKWVSEQTHKIQYRVLQSRYRGRTTCPDCRGTRLRKDA
QYVKIQGQSITDLVLLPVSRALEFFQNLDLPTHEAKVAERLVTEVTNRLEYLNRVGLGYL
TLNRLSSTLSGGESQRISLATSLGSALVGSMYILDEPSIGLHPKDAEQLIGVLRSLQQLG
NTVIVVEHEDKMMEQADQIIDIGPEAGSGGGILQFQGTYAEVLASDTYTGQYLSGRMQVA
VPKTRRPWRNALELTGARENNLKNVSVKFPLNVMTVVTGVSGSGKSTLIRRILAPALLKQ
LGGGAGEATGKFDRLLGVNGQVTHVEFVDQNPIGKSSRSNPVTYVKAYDAIRSLFADQQL
AKARGFKPSHFSFNIDGGRCEVCQGEGQVKIEMQFMADIYLTCEACEGRKFKQDVLDVQY
KEKSINEVLEMTIEDSIEFFKDQPKIVERLKPLDDVGLGYIRLGQSANTLSGGEAQRVKL
ASFLTKGNTLQNDKILFIFDEPSTGLHFHDINKLMTALNALVEQGNSVLIIEHNMDIIKC
ADWVIDLGPEGGINGGHLLFEGTPEEMVKLKDTNHTARFLADKL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggcctccactaccgatctgcaagtagccgcccccgcggccgaccccatcgaccagctc
gacccgcgcgagtttatcctgatcaaaaacgcccgggtgcataacctgaagaatctgagc
gtggccctgccgcgcaacaagttcatcgtcgtcacgggcctctcgggctcgggcaagtcg
tcgttggcgtttgatacgctttacgccgagggccagcgcatgtacgtggaaagcctgagc
tcctacgcccgtcagttcctgggccgcatggacaagcccgacgtggactacatccggggc
atttcgccggccattgccatcgagcagaaggtcagcatcaagaacaaccgctccaccgtg
ggcaccagcaccgaaatctacgactacctcaagctgctgtttgcacgcgtaggccgcacc
tactcgcccgtgagcggggagcaggtgaaaaaggataacgtggccgacgtggtggactac
ctcatgcagctgccggagggcacccgcgtgacgctgctctccccattgctgccctccgaa
gatggccgcccaatgagcaaggagctggatttgctgcttcagaaaggctacagccgcgtg
gtggtgaacggcgaaacggcctttattgaagagctgattgccgaaggccagcccgaagtg
cagggcgacgtgttcatcatgattgaccgcaccgccatccagccgggcgatgaagacctg
atgttccgcctcgccgactcggtgcagaccgccttcttcgagggccacggcacctgcatc
gtgaagatggacgaggaaacccgcactttctccgaccggtttgagctggacgggctggtg
tttgaggagccgagcgtcaacttcttctccttcaacaacccttacggcgcctgccagacc
tgtgaagggttcggctcggtgctgggtattgacgaggacctcgttattcccgataagagc
ctgacagtgtatgagggcgccattgccccttggcgtaccgacaagcagagcgagtggctg
aagcccctgctcaaaaatggcatccgcttcgatttccccattcaccggccctacaacgag
ttgagtgaggctgagcggaacttgctgtggaaaggcaacaagtacttcgacgggctggat
aaatacttcaagtgggtatcggagcagacgcacaaaattcagtaccgcgtgctgcaaagc
cgctaccggggccgcaccacctgccccgactgccgcggtacccgtctgcgcaaagacgcc
cagtacgtgaaaattcagggtcagagcattaccgacctggtattgctgccggtaagccgg
gccctggagtttttccagaacctcgacttgcccacgcacgaagccaaagtggccgagcgc
ctcgtgacggaagtcacgaaccgcttggagtacctgaaccgcgtgggcctgggctacctc
acgctcaaccgcctcagcagcacgctctcgggcggggaaagccagcggatttccttggct
acgtctctgggttcggcgctggtgggctccatgtacatcctcgatgagccttccattggc
ctgcacccgaaggatgccgagcagctgattggggtgctgcgctccttgcagcagctcggc
aacaccgtgattgtagtagagcacgaggataagatgatggagcaggccgaccagatcatc
gacatcgggcccgaggccggcagcgggggcggtatcctgcaattccagggcacctacgct
gaagtgctggcctccgatacctatacagggcagtacctgagtggccgcatgcaggtggcc
gtgcccaaaacgcgccgcccctggcgcaacgccctggagctaaccggcgcccgcgaaaac
aacctcaaaaacgtgtcggtgaagtttccgctgaatgtgatgacggtggtaacgggcgta
tccggctccggtaaatccacgctcattcggcggattctggctccggccctgctcaagcag
ctcggcggaggcgcgggcgaagccaccggcaagttcgaccggctgctcggggtaaacggg
caggtaacccacgtggagttcgtggaccagaaccccatcggcaagagcagccgctccaac
cccgtgacgtacgtgaaggcctacgacgccatccgcagcctgtttgccgatcagcagcta
gccaaggcccggggcttcaaaccttcgcacttctccttcaacatcgacgggggccgctgc
gaggtgtgccagggagaaggccaggtgaagattgaaatgcagttcatggccgatatctac
ctgacctgcgaggcctgcgagggccgcaagttcaagcaggatgtgctggacgtgcagtac
aaggagaaaagcatcaacgaggtgctcgaaatgaccattgaggacagcatcgagttcttc
aaggatcagcccaagattgtggagcgcctcaagccgctggacgatgtaggcttggggtat
atccgcctggggcagtcggccaatacgctgtcgggcggggaggcccagcgcgtgaagctg
gcgtcgttcctgaccaagggcaacaccctgcagaacgataaaatcctgttcatcttcgat
gagcccagcaccggcctgcacttccacgacatcaacaagctgatgacggccctgaacgcg
ctggtggagcagggtaactccgtgctcatcatcgagcacaacatggacatcatcaagtgt
gccgactgggtgattgacctgggccccgagggcggcatcaacggcggccacctgctgttt
gaaggcacgcccgaggagatggtgaagctcaaagacaccaaccacacggcccgcttcctg
gctgataagctgtag
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