KEGG   Hymenobacter sp. BT18: HER32_13160
Entry
HER32_13160       CDS       T06970                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
hrs  Hymenobacter sp. BT18
Pathway
hrs03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hrs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    HER32_13160 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hrs03400]
    HER32_13160 (uvrA)
DNA repair and recombination proteins [BR:hrs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HER32_13160 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      HER32_13160 (uvrA)
SSDB
Motif
Pfam: ABC_tran UvrA_inter SMC_N UvrA_DNA-bind AAA_21 AAA_16 nSTAND1 AAA_29 RsgA_GTPase AAA_22 DnaJ_CXXCXGXG AAA_33 Viral_helicase1 AAA_18 nSTAND3 ATPase_2 cobW FtsK_SpoIIIE NACHT
Other DBs
NCBI-ProteinID: QIX62083
LinkDB
Position
3063567..3066401
AA seq 944 aa
MASTTDLQVAAPAADPIDQLDPREFILIKNARVHNLKNLSVALPRNKFIVVTGLSGSGKS
SLAFDTLYAEGQRMYVESLSSYARQFLGRMDKPDVDYIRGISPAIAIEQKVSIKNNRSTV
GTSTEIYDYLKLLFARVGRTYSPVSGEQVKKDNVADVVDYLMQLPEGTRVTLLSPLLPSE
DGRPMSKELDLLLQKGYSRVVVNGETAFIEELIAEGQPEVQGDVFIMIDRTAIQPGDEDL
MFRLADSVQTAFFEGHGTCIVKMDEETRTFSDRFELDGLVFEEPSVNFFSFNNPYGACQT
CEGFGSVLGIDEDLVIPDKSLTVYEGAIAPWRTDKQSEWLKPLLKNGIRFDFPIHRPYNE
LSEAERNLLWKGNKYFDGLDKYFKWVSEQTHKIQYRVLQSRYRGRTTCPDCRGTRLRKDA
QYVKIQGQSITDLVLLPVSRALEFFQNLDLPTHEAKVAERLVTEVTNRLEYLNRVGLGYL
TLNRLSSTLSGGESQRISLATSLGSALVGSMYILDEPSIGLHPKDAEQLIGVLRSLQQLG
NTVIVVEHEDKMMEQADQIIDIGPEAGSGGGILQFQGTYAEVLASDTYTGQYLSGRMQVA
VPKTRRPWRNALELTGARENNLKNVSVKFPLNVMTVVTGVSGSGKSTLIRRILAPALLKQ
LGGGAGEATGKFDRLLGVNGQVTHVEFVDQNPIGKSSRSNPVTYVKAYDAIRSLFADQQL
AKARGFKPSHFSFNIDGGRCEVCQGEGQVKIEMQFMADIYLTCEACEGRKFKQDVLDVQY
KEKSINEVLEMTIEDSIEFFKDQPKIVERLKPLDDVGLGYIRLGQSANTLSGGEAQRVKL
ASFLTKGNTLQNDKILFIFDEPSTGLHFHDINKLMTALNALVEQGNSVLIIEHNMDIIKC
ADWVIDLGPEGGINGGHLLFEGTPEEMVKLKDTNHTARFLADKL
NT seq 2835 nt   +upstreamnt  +downstreamnt
atggcctccactaccgatctgcaagtagccgcccccgcggccgaccccatcgaccagctc
gacccgcgcgagtttatcctgatcaaaaacgcccgggtgcataacctgaagaatctgagc
gtggccctgccgcgcaacaagttcatcgtcgtcacgggcctctcgggctcgggcaagtcg
tcgttggcgtttgatacgctttacgccgagggccagcgcatgtacgtggaaagcctgagc
tcctacgcccgtcagttcctgggccgcatggacaagcccgacgtggactacatccggggc
atttcgccggccattgccatcgagcagaaggtcagcatcaagaacaaccgctccaccgtg
ggcaccagcaccgaaatctacgactacctcaagctgctgtttgcacgcgtaggccgcacc
tactcgcccgtgagcggggagcaggtgaaaaaggataacgtggccgacgtggtggactac
ctcatgcagctgccggagggcacccgcgtgacgctgctctccccattgctgccctccgaa
gatggccgcccaatgagcaaggagctggatttgctgcttcagaaaggctacagccgcgtg
gtggtgaacggcgaaacggcctttattgaagagctgattgccgaaggccagcccgaagtg
cagggcgacgtgttcatcatgattgaccgcaccgccatccagccgggcgatgaagacctg
atgttccgcctcgccgactcggtgcagaccgccttcttcgagggccacggcacctgcatc
gtgaagatggacgaggaaacccgcactttctccgaccggtttgagctggacgggctggtg
tttgaggagccgagcgtcaacttcttctccttcaacaacccttacggcgcctgccagacc
tgtgaagggttcggctcggtgctgggtattgacgaggacctcgttattcccgataagagc
ctgacagtgtatgagggcgccattgccccttggcgtaccgacaagcagagcgagtggctg
aagcccctgctcaaaaatggcatccgcttcgatttccccattcaccggccctacaacgag
ttgagtgaggctgagcggaacttgctgtggaaaggcaacaagtacttcgacgggctggat
aaatacttcaagtgggtatcggagcagacgcacaaaattcagtaccgcgtgctgcaaagc
cgctaccggggccgcaccacctgccccgactgccgcggtacccgtctgcgcaaagacgcc
cagtacgtgaaaattcagggtcagagcattaccgacctggtattgctgccggtaagccgg
gccctggagtttttccagaacctcgacttgcccacgcacgaagccaaagtggccgagcgc
ctcgtgacggaagtcacgaaccgcttggagtacctgaaccgcgtgggcctgggctacctc
acgctcaaccgcctcagcagcacgctctcgggcggggaaagccagcggatttccttggct
acgtctctgggttcggcgctggtgggctccatgtacatcctcgatgagccttccattggc
ctgcacccgaaggatgccgagcagctgattggggtgctgcgctccttgcagcagctcggc
aacaccgtgattgtagtagagcacgaggataagatgatggagcaggccgaccagatcatc
gacatcgggcccgaggccggcagcgggggcggtatcctgcaattccagggcacctacgct
gaagtgctggcctccgatacctatacagggcagtacctgagtggccgcatgcaggtggcc
gtgcccaaaacgcgccgcccctggcgcaacgccctggagctaaccggcgcccgcgaaaac
aacctcaaaaacgtgtcggtgaagtttccgctgaatgtgatgacggtggtaacgggcgta
tccggctccggtaaatccacgctcattcggcggattctggctccggccctgctcaagcag
ctcggcggaggcgcgggcgaagccaccggcaagttcgaccggctgctcggggtaaacggg
caggtaacccacgtggagttcgtggaccagaaccccatcggcaagagcagccgctccaac
cccgtgacgtacgtgaaggcctacgacgccatccgcagcctgtttgccgatcagcagcta
gccaaggcccggggcttcaaaccttcgcacttctccttcaacatcgacgggggccgctgc
gaggtgtgccagggagaaggccaggtgaagattgaaatgcagttcatggccgatatctac
ctgacctgcgaggcctgcgagggccgcaagttcaagcaggatgtgctggacgtgcagtac
aaggagaaaagcatcaacgaggtgctcgaaatgaccattgaggacagcatcgagttcttc
aaggatcagcccaagattgtggagcgcctcaagccgctggacgatgtaggcttggggtat
atccgcctggggcagtcggccaatacgctgtcgggcggggaggcccagcgcgtgaagctg
gcgtcgttcctgaccaagggcaacaccctgcagaacgataaaatcctgttcatcttcgat
gagcccagcaccggcctgcacttccacgacatcaacaagctgatgacggccctgaacgcg
ctggtggagcagggtaactccgtgctcatcatcgagcacaacatggacatcatcaagtgt
gccgactgggtgattgacctgggccccgagggcggcatcaacggcggccacctgctgttt
gaaggcacgcccgaggagatggtgaagctcaaagacaccaaccacacggcccgcttcctg
gctgataagctgtag

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