Hirundo rustica (Barn swallow): 120755863
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Entry
120755863 CDS
T09369
Symbol
MSH4
Name
(RefSeq) LOW QUALITY PROTEIN: mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrt03036
]
120755863 (MSH4)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Meiosis-specific proteins
Others
120755863 (MSH4)
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
120755863
NCBI-ProteinID:
XP_039927379
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All DBs
Position
8:36032823..36058799
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AA seq
934 aa
AA seq
DB search
MAGTGGRTGTSESYTGRGSSTPGVCGRAEQTPRYTLGLLQTPHSSESTGGSSSGGARPSG
SSGEGLAAGRAARSSALKPAVSERGESYFGDKSSCVENANTLNLTSSSSVRGLNSTCVGK
TPLSSGRSGCRSHTPLMGYSVTSSSAVSAHVASVIVAVVEGRGLARGEVGLASIDXKNPE
VILSQFADNTTYAKVITKLKILTPLEIIMSNTACDAGNTNKMFNLITEHFKNVTFTTVQR
KYFNETKGLEYIEQLCASEFSTIFMEVQSKYYCLAAAAALLKYVEFVQTPFIAPKSLKVR
FPREXEKTAMIDSSSAQNLELVINNRDSRNGHTLLGILNYTKTPGGSRRLRSNILEPPVD
VETINTRXDCVQELLQDEELXFGLQAVISKFLDTEQLLSVLVQIPKQDTVKTAESKITNL
IYLKHTLELVEPLKAALRSCNTQLLKAYYNSLEDTRFGIILEKITTVINDDTRYTKGCLS
MRTQKCYAVKPNISEFLDIARRTYSKIVDDIAGMITQLAEKYSLPMKTXFSSARGFFIQM
NADCSTLPNGQLPSEFTKITKMKNTYSFTSADLIKMNERCQESLREIYHMTYLIVCKLLN
EIYEHIHCLYKLSDVVSVLDLLLSFAHACALSDCVRPEFTDTLAIKQGMASHSXKIAMEK
PVSNNTYLTEGNNFVIITGPNMSXKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAEQIFT
RIGMDDDIETNASTFMKEMKEITYIIQNANDKSLIILMSLAEVVPVPKEGIGICYAACEY
LLNLKAFTLFATHFLELCHIDALYPNVENYHFEVQHVRSSAGNKEKIAYTYTLSKGYTEE
KNYGLKAAEVSSLPSSIILDAKEITNHIAKQILHRQKSTPEMMKQRAAYQLAMRLVQTAR
NSRLDPDSLRVYLKALKKRYEASCPTPGENDEQQ
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcacgggagggcggacgggcacctcggagtcttacacgggccgcggctcctcc
acgccgggcgtgtgcgggcgggcggagcagacgcctcgctacactctgggtcttctgcag
actccgcacagctcggagagcaccgggggctcctccagcggcggggcacgtccgagcggt
tccagcggcgaaggcctcgcagccggccgggccgccaggagcagcgcattgaagccggcg
gtttccgaaaggggagaatcatattttggggacaaaagttcttgtgtagaaaatgctaac
acattgaatctcacaagttcttcttctgtgcgaggcctgaatagcacatgtgtagggaaa
acgcctctctcttctggtagatctggttgcagaagccatacccctcttatgggatattca
gttacatcctcatctgcagtttctgctcatgttgcatcggttattgtagctgtagtagaa
ggaagaggccttgccagaggtgaagttggactggccagtatagatnttaaaaatcctgag
gtgatattgtcacaatttgcagacaatacaacttatgccaaggttattactaaactcaag
attttaacaccactagaaataataatgtcaaacactgcttgtgatgcagggaatacaaac
aaaatgttcaatctgataacagaacatttcaagaatgtgacttttacaactgtccagaga
aaatacttcaatgaaacaaagggtttggagtacatagaacaattgtgtgcatctgaattt
agcaccattttcatggaagtccaatcaaagtattactgtcttgcagctgctgcagctttg
ctaaaatacgttgaatttgttcaaactccgtttattgcccctaaatcactaaaggtgcgt
tttccaagggagtgagaaaaaaccgctatgatagattcatcatcagcacaaaatcttgaa
ctagtgattaataatagagattctcggaatggtcacacacttcttggtattctaaattat
actaaaactcctggtggaagtcgaagacttagatctaatatcctggaacctccagttgat
gttgaaacaattaacacaaganctgactgtgttcaggagttactccaggatgaggagctc
ntttttggtcttcaagcagtgatctcaaaattcctggatacagaacaactactttcagtt
ttggtacagattccgaagcaagatacagttaaaactgctgagtcaaaaataactaattta
atctacctgaagcataccttagaacttgtggagcctctaaaagctgctctaagaagctgc
aacacacagctgctaaaggcttattacaattctcttgaagatacgagatttggaattata
cttgaaaagattacaactgtaattaacgatgatacaagatacacaaaaggatgtctgagt
atgaggacccagaagtgctatgctgttaagcctaacatcagtgaattccttgacatagct
cgtagaacatacagtaaaattgttgatgacatagcaggtatgataacacaacttgcagaa
aagtacagcctaccaatgaaaacangtttcagctctgctcgtggattttttattcagatg
aatgctgattgttcaacattgcctaatggtcagcttccttcagaatttacaaagatcacg
aaaatgaaaaacacatacagcttcacttcagcagatttaataaaaatgaatgaaagatgt
caggagtccctgagagaaatatatcacatgacctacttaatagtgtgtaaactactgaat
gaaatctatgaacacattcattgcttatacaagctgtctgacgttgtgtctgtgctggat
ctgctgctttcatttgcccacgcctgcgccctttctgattgtgttcgtccagaatttacc
gatactttagcaatcaagcaggggatggcatcccattcttgaaagatagctatggaaaaa
cctgtgtctaacaacacatacctgacagagggcaacaattttgtcattattacaggaccc
aatatgagtngaaaatcaacatacctgaaacaaattgctctctgtcaaataatggcacag
attggttcttacgtcccagcagagtattgttcttttcgaattgcagagcagatttttacc
agaataggtatggatgatgatattgaaacaaatgcatcaacattcatgaaggaaatgaaa
gagataacgtacatcatacaaaatgctaatgataaatccctcatcatattgatgagcttg
gcagaggtggtaccagtgccgaaagaaggtattggcatttgttatgctgcctgtgaatat
ctgttgaatttaaaggcatttacactgtttgctacacatttcctggaattatgtcatata
gacgctttatatcccaacgtggaaaactaccattttgaagtgcagcatgtgagaagcagt
gctggaaataaggagaaaattgcttacacttacacactttctaaaggatacacagaggaa
aagaactatggactaaaagccgcagaagtgtcctccctaccatcctccataattttggat
gcaaaggaaataacaaatcatatcgcaaaacaaattttgcacaggcagaagagcactcct
gagatgatgaaacagagagctgcgtaccagttagcaatgagattggttcagactgccaga
aattctcgactggaccctgacagtttgcgggtgtatttgaaagccctgaagaaaaggtat
gaagccagttgtcctacacccggagaaaatgatgagcaacagtaa
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