Hirundo rustica (Barn swallow): 120755975
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Entry
120755975 CDS
T09369
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120755975
Membrane trafficking [BR:
hrt04131
]
Protein recycling
Others
Others
120755975
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Ortholog
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GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
120755975
NCBI-ProteinID:
XP_039927553
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Position
8:complement(25327603..25595747)
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AA seq
1267 aa
AA seq
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MEKVAGWYTAWHVALLYWTWLFLFTYGFTGAEITCRSCRSQVQPQQQPQQGLLMHLRTDR
GEKEQRRFLGEKGGERGQEAGTDDAGTDDAGTDDAGLQETLSPAPAGMEFSGWETRRVSR
EPQKVAGERRPRAAAAAPAQDRPLRALPRPGSVRRRWGRSPRGSAGPGPGGAAGREPGDG
GAARFGLEELRLASTTFALAGDSAHNQAMVHWSGHNSSVILILTKLYDYNLGSITESSLW
RSTDYGTTYEKLNDKVGLKTILSYLYVCPTNKRKIMLLTDPEVESSLLISSDEGATYQKY
RLNFYIHSLLFHPKQEDWILAYSQDQKLFSSVEFGRRWLLLHEGVTPNRFYWSMMGNGRE
ADLVHLEARAVDGHAQYITCKMQNCSEATRSKPFPGYIDHNSLIVQGDYVFVQLTSGGRP
HYYVSYRRSPFAQMKLPKYSLPKDMHVISTDENQVFAAVQEWNQNDTYNLYISDTRGVYF
TLALENVKSSQGLEGNVMIDLYEVAGIKGMFLANKKIDNQVKTFITYNKGRDWSLLQAPH
TDLRGNPIQCLLPYCSLHLHLKVSDNPYTSGNIASRDTAPSIIVASGNIGTELSDSDISM
FVTSDAGNTWRQIFEEEHSVLYLDQGGVLVAMKHTSLPIRHLWLSFDEGRSWSKYSFTSL
PLFVDGVLGEPGEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPWQLHSQGE
ACIMGAKRIYRKRKSEKKCMQGKYAGAMTSEPCVCTEADFDCDYGYERHSNGQCLPAFWY
NPSSLSKDCSLGQSYLNSTGYRKVVSNNCTDGVRERYTAKPQQCPGKAPQGLRIVTADGR
LTAEQGHNVTFLVQLEEGDLQRSLIQVDFGDGIAVSYANLSSTEDGIKHIYQNVGIFRVT
VLVENSLGSDSAVLYLHVTCPLEHVHLSLPFVTTKNKEINATAVLWPSQVGTLTYVWWFG
NNTEPLITLEGSITFTFSVEGMNTITVQVSAGNTILQDTKTIAVYEKFQSLRLSFSPNLD
DYNPDIPEWRRDISRVVKRALVEATGISSKNVLVAVLPGLPTSAELFILPYQDGPGEKKR
TEANLEQISETLIQKLNQNLVHFELKPGVRILVHAAHLTAAPLVDLTPSHSGSAMLMLLS
VVFVGLAVFVIYKFKRKIPGLNIYAQMQNEKDQEMVSPVSQRESIPNVPQSELMSPEQLV
DEKLEVHPIEQPQATAQNPRKGNATKVVWTEDFQKACGSPRDFKPRPRAEVFPHLLSPRA
QKKSLPM
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagttgctggctggtacacagcctggcacgttgctctcctgtactggacatgg
cttttcctcttcacttacggctttaccggcgcagaaataacttgcagatcctgccgttcc
caggtgcagccgcagcagcagccgcagcagggattactgatgcacttgaggaccgacaga
ggagaaaaggagcaaaggaggttcctcggggagaagggaggcgagagagggcaagaggcc
gggacggatgatgccgggacggatgatgccgggacggatgatgccgggctgcaagagacc
ctctccccggctcccgcggggatggaattcagcggctgggagacacggcgagtgtcgaga
gagccgcagaaagtggccggggagcgccgtccccgagcggcagcggcggctccggcccag
gaccgacccctccgggccctcccccggccgggctcggtgcggcggcgctggggccgcagc
ccgcggggctccgcggggccggggccgggcggcgccgcggggcgggagccgggggacggc
ggcgccgcccgcttcgggctggaggagctgcgcctggccagcaccaccttcgccctggcc
ggagactcggcgcacaaccaggccatggtgcactggtccggccacaacagcagcgtgatt
ctaattctgaccaagctgtatgactacaacctgggaagcatcacggagagctctctttgg
aggtcaacagattatgggacaacatatgagaaactgaatgataaagttggtctgaagact
attttgagctacttatatgtttgtccaacaaacaaacgtaagattatgctgctgactgat
ccagaagttgaaagcagcttattaatcagttctgatgaaggagccacctatcaaaaatac
cgtctaaacttctacatccacagtctgctcttccaccccaaacaggaagattggatctta
gcctacagccaagatcagaagttattcagttctgtggagtttggcagaagatggctgctt
cttcatgagggagttacaccgaacaggttctactggtctatgatggggaatggaagagag
gctgacctcgtgcacctggaggcaagggcagtggatggtcatgcccaatacatcacctgc
aagatgcagaactgcagtgaagccactcgtagcaaaccctttccaggctacattgaccat
aactccctgatcgtccagggtgattatgtctttgttcagctgacatcaggtggaagacca
cattattacgtttcttataggaggagcccatttgcacagatgaagctgccaaagtactcc
ttgcccaaggacatgcatgttatcagcacagatgagaatcaggtgtttgcagctgtacag
gagtggaaccagaacgacacgtacaatctgtacatctccgacacccgaggggtctacttc
accctggccttggaaaacgtcaagagtagtcaagggctggaggggaatgtgatgattgac
ctctatgaggtagcagggataaagggaatgttcttggctaacaagaagattgacaaccaa
gtgaaaactttcatcacctacaataaggggagagactggagtttgttgcaggctccgcac
acggatctgagaggaaatcccattcagtgtctcctaccttattgctcacttcatcttcac
ttgaaggtctcagacaacccctacacctcaggaaacatcgccagccgagacactgccccc
agtattattgtagcttcaggtaatataggcactgaactatcagacagtgatatcagcatg
tttgttacttctgatgctggaaacacttggaggcagatctttgaggaagagcacagtgtc
ttgtacctggatcagggtggtgtgctcgttgccatgaaacacacatctctgccaatcaga
cacctctggttaagttttgatgaagggagatcttggagcaagtacagtttcacatccctc
ccactgtttgtagatggagttttaggggagcctggagaggaaaccctcatcatgactgtg
tttggacatttcagccaccgctcagagtggcagctggtgaaagtagactacaagtccatt
tttgatcggagatgtgcggaagaggactacaggccgtggcaactccatagccagggagaa
gcctgcatcatgggagcaaaaaggatctacaggaagcgcaagtcagagaagaaatgcatg
caagggaagtacgctggggctatgacctcggagccgtgcgtgtgcacagaggcagacttt
gactgtgattatggttatgaacgccacagcaatggccagtgcttaccggcattttggtat
aacccatcctccttgtcaaaagattgcagccttggacaaagttacctcaacagcaccggg
taccggaaggtggtttccaacaactgcacggacggggtgcgcgagaggtacacggccaag
ccccagcagtgcccgggcaaagccccgcagggcctccgcatcgtcacggccgacggccgg
ctcacggccgagcagggccacaacgtcaccttcctggtgcagctggaggagggagacctc
cagagatccctcattcaggtggattttggagatggcatcgctgtgtcatacgccaatctc
agctcaacagaagatgggatcaagcacatctaccagaacgtgggcatattccgcgtgacc
gtgctggtggaaaacagcctgggttctgacagcgctgtcctctacctgcatgtaacatgc
cccttggaacacgttcacttatctctgccctttgtcaccacgaagaacaaggagatcaac
gccacagcggtgctctggcccagccaagtgggaacacttacttatgtctggtggtttggg
aacaacacagagccactgatcacattggaagggagcatcacattcacattttctgtggaa
gggatgaacaccattactgttcaggtctcagcaggaaacaccattcttcaggacacaaag
actattgcagtgtatgagaaatttcagtccctgaggttatcgttctctccgaacctcgat
gactacaacccagatatcccagagtggagaagggacatcagcagagtagtcaagagagct
ctggtggaggctacaggtatttccagcaagaatgttctggtcgcagtgctccctggcctg
cccacgtctgctgaactcttcattttaccatatcaagatggcccaggagaaaagaaaaga
acagaagcaaacctggagcagatttcagaaacgctgatccagaaactgaatcaaaacctg
gtccattttgagttgaagccaggggttcgaatccttgtccatgctgcccatttaacagca
gctcccctggtggacctcactcccagtcacagtggttcagccatgctgatgctcctctct
gttgtttttgtgggactagctgtgtttgtcatctacaagttcaaaaggaagattcctggc
cttaatatatatgcacagatgcagaatgaaaaagatcaagagatggtcagtccagtcagt
cagagggaaagcatacctaatgtccctcaaagtgagctgatgagccctgagcaactagta
gatgagaagttggaagtccaccccatagagcaacctcaggccacagcccagaacccaagg
aaaggaaatgcaaccaaggtagtctggacagaggacttccaaaaagcttgtggatcacca
agagatttcaagccaagacccagagcggaagtatttccacatctgctgagccccagagca
caaaagaaatccctacctatgtaa
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