Hirundo rustica (Barn swallow): 120757000
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Entry
120757000 CDS
T09369
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hrt01002
]
120757000 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120757000 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrt04147
]
120757000 (USP13)
Enzymes [BR:
hrt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120757000 (USP13)
Peptidases and inhibitors [BR:
hrt01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120757000 (USP13)
Ubiquitin system [BR:
hrt04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120757000 (USP13)
Exosome [BR:
hrt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120757000 (USP13)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
120757000
NCBI-ProteinID:
XP_039929895
LinkDB
All DBs
Position
10:complement(19000462..19050260)
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AA seq
861 aa
AA seq
DB search
MQRAALFRGGDAQMAAGDLGELLVPYMPTIRVPKSGDRVYKTECAFSYDSPDSEGGLYVC
MNTFLGFGREHIERHYRKTGQCVYLHLKRHVVEKVPGASGGALPKRRNAKLFLDLEISSD
LNSDDFEYEDEAKLVIFPDHYEISLPNIEELPALVTIACDALLSAKSPYRKQEPDSWEEE
LQASKHAKTLVQLDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGRWFFDGSGGNGHA
MEHYKDTGYPLAVKLGTITPDGADVYSFDEEEPVLDPHIAKHLAHFGIDMLQMQVTENGL
RDNDIKPRVSEWEVIQEAGVKLKPMYGPGYTGMKNLGNSCYLNAVMQAIFSIPEFQRAYV
GNLPRIFDYSPLDPTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKPQHNGIS
PRMFKAFISKGHPEFSSNRQQDAQEFFLHLINLVERNPVGSENPSDVFRFLVEERTQCCQ
SRKVRYTERVDYIMQLPVAMEAATNKDELIAYELKRREAEAARRPLPELVRAKIPFSACL
QAFSEPSNVEDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWIPKKLDVSIDM
PDFLDISHLRARGLQPGEEELPDIAPPIVIPDDPKDLMTNNFVESLDIDESSVMQLAEMG
FPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLVIPAFGEVASSGAAALGAVGLD
NQPPEEMVAIIISMGFQRNLAIQALKATNNNLERALEWIFSHPDPEEESDPALDTMDMEN
HANANILAETGSEGPRIKDGPGRYELFGFISHMGTSTMSGHYVCHLRKEGRWVIYNDLRV
CASERPPKDLGYIYFYHRIPS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgggccgcgctcttccgcggcggcgatgcgcagatggccgccggggacctgggc
gagctgctcgtcccctacatgcccacgatccgggtgcccaagtcaggggaccgggtctac
aagacggaatgtgccttctcctacgactcgcccgattcagaaggaggtctctatgtgtgc
atgaacacatttctgggatttggaagggaacacatcgaaaggcattaccggaaaacagga
cagtgtgtctacctgcacctgaaacgccacgtggtagagaaggtaccgggagcatctggt
ggagctttaccaaaaaggaggaatgctaagctatttttagatctggagataagcagtgat
ctcaacagtgatgactttgaatatgaggatgaagcaaaacttgttatctttcctgatcac
tatgaaatctcattacccaacatagaagagctaccagcgctggtgacgatagcttgtgat
gcgctcctcagtgcaaaatcaccctacaggaagcaggaacccgactcctgggaagaagag
ctgcaggcatctaagcatgctaagacgcttgtacagttagacaatggtgttagaataccc
cccagcggttggaaatgctccaagtgtgacctgcgggagaacctgtggctgaacctgacc
gatggctctgtgctctgtgggaggtggttcttcgatggcagcgggggcaatgggcatgcc
atggagcactacaaggacacaggttatcccctggcagtgaagctgggaaccatcactcct
gatggagcagatgtctattcctttgatgaagaggagccggttttagatccgcacatagca
aagcatttggcacactttggaattgatatgctgcagatgcaagtgacagagaatgggctg
agagataatgacataaagccaagagtctcagaatgggaagtgattcaggaagctggagta
aaactcaagcccatgtatggcccaggatacactggcatgaagaacctgggaaatagctgc
tacctcaacgctgtcatgcaagcaattttcagcatcccagagttccagcgagcgtacgtg
ggaaaccttccacgaatatttgactactcccctcttgatccaacacaagatttcaacact
cagatggctaaactgggacacggcctcctttcgggccaatactctaagccacccatgaaa
tctgagctcattgagcaggtgatgaaagaagaacacaagcctcaacacaatggaatatct
cctcgcatgttcaaagcttttataagtaaaggccacccagaattttcctctaatagacaa
caagacgcacaggaatttttcctacatcttataaatctagtagagaggaaccctgtgggt
tcggaaaaccccagcgacgttttccggttcctggtggaggagcgcacgcagtgctgccag
tcccggaaggtgcgctacacagagagggtggactacatcatgcagttacccgtggccatg
gaggcagcaacaaacaaagatgaattaattgcctatgaattgaagaggcgagaagcagaa
gctgcaaggagacctctgccagagctggtccgtgccaagatccccttcagtgcatgtctg
caggccttttctgaaccaagcaacgtagaggatttctggagcagtgcccttcaagcaaaa
tctgcaggagttaagacttcccgttttgcttcctttcctgagtacttagtggtgcagata
aagaaattcacctttggccttgactggatacccaaaaagcttgatgtttctatagacatg
ccagatttcctggatatcagtcaccttcgggccagggggctccagccaggagaagaggaa
ctcccagacattgctcctcccattgtcattcctgatgacccaaaagatctcatgacgaac
aatttcgtggagtccctagatattgatgagtcttcagtcatgcagctggcagagatgggc
tttcctctggaagcatgtcggaaagctgtgtactatacaggcaacctgggtgctgaagtt
gctttcaactggatcattgcacacatggaagagccagactttgctgagccattggtcata
cctgcatttggagaagttgcttccagtggggcagctgctttaggagctgtagggctggat
aaccagcctcctgaagagatggttgcaattatcatatccatgggattccaaaggaatctg
gcgatccaggcgctgaaggcaacaaacaataacttggagcgtgcactggagtggatcttc
agccaccctgaccctgaggaagaaagtgaccctgctttggacaccatggatatggagaac
catgccaatgccaacatccttgcagagacagggtcagagggacccaggatcaaagatggc
cctggaaggtatgagctgtttgggttcatcagccacatgggaacatccacaatgagtggc
cactatgtttgtcacctcagaaaggaaggaagatgggtgatctacaacgaccttagagtc
tgtgcctcagaacgacctcccaaagacctgggctacatttatttttaccacaggatacca
agttag
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