Hirundo rustica (Barn swallow): 120760442
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Entry
120760442 CDS
T09369
Symbol
TPCN1
Name
(RefSeq) two pore channel protein 1 isoform X1
KO
K16896
two pore calcium channel protein 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120760442 (TPCN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrt04040
]
120760442 (TPCN1)
Ion channels [BR:
hrt04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
120760442 (TPCN1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TcdB_toxin_midC
ECSCR
SurA_N_2
Motif
Other DBs
NCBI-GeneID:
120760442
NCBI-ProteinID:
XP_039936657
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Position
17:complement(9822469..9864524)
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AA seq
817 aa
AA seq
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MAVSMDDDVPLILTLDDSGSSASAPLDELDREELPNENGGSYDVVNDASSPAARECCAQQ
SSARHNWEMNYQEAAIYLQEGENNDKFFTHPKNAKALAAYLFAHNHLFYLMELSTALLLL
LLSLCEAPAVPMLRLGIFVHATLELFALIVVVFELSMKMRWLGFQTFIRHKRTMVKTCVL
FVQFIEAIVVLVRQTSHVRITRALRCIFLVDCRYCGAVRRNLRQIFQSLPPFIDILLLLL
FFMVIFAILGFYLFSPNHSDPYFNTLENSLVNLFVLLTTSNFPDVMMPSYARNPWSCVFF
IVYLSIELYFIMNLLLAVVFDTFNDIEKRKFKSLLLHKRTAIQHAYRLLVTKQRPSGISF
KHFEGLLRFYKPRMCARERYLTFKALNQSNTPLVSLKDFYNFYEVVGLKWKAKRNREHWF
DDLPRTAFLIFKGINILVKSRVFQYTMYTVVAVNGIWILVETFMLQGGNFFSRNVPWSYI
VFLTIYGVELLLKTTGLGPVEYLSSGWNLFDFSVTLFAFLGLMALAFNMEPFYFIVVLRP
LQLLRLFKLKKRYRNVLDTMFELFPRMASLGLTLLIFYYCFAIVGMEFFAGVVYPNCCNT
STVADSYRWVNHTVGNKTVVEEGYYYLNNFDNILNSFVTLFELTVVNDWYIIMEGVTSQT
THWSRLYFMTFYIVTMVVMTIIVAFILDAFVFRMNYTRKNQDSEEDNGIVLEKEISKEEV
IGIIELYKRTSAATETAQLQKIVLQMDKYGQMSTVFLGRRSRTKSDLSMKMYEEEIQEWY
EEHSRKEESQTPLQEPASASSSSLKPLSLRQRSQTVI
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgagcatggacgatgatgttcccctgatcctcaccctggacgacagcgggagc
agcgcctcagcccctctggatgagctggatcgggaggagctgcctaacgaaaatggaggc
agctatgacgttgtcaacgacgcctccagccccgcggccagggagtgctgcgcccagcag
agctctgcccggcacaactgggagatgaactaccaagaggcagccatctacctccaggaa
ggagaaaataatgacaagttcttcactcaccccaaaaatgccaaagcactcgctgcctac
ctctttgcacacaaccaccttttctacctgatggagctgagcacggccctgctgctcctg
ctgctgtccctctgcgaggctccagcggtccccatgctccgtctgggcatctttgtccac
gcaaccctggagctgtttgcgttaatcgtggtcgtctttgagctctccatgaagatgagg
tggctgggcttccaaaccttcatcaggcacaaaaggactatggtcaagacgtgcgtgctg
ttcgtgcagttcatcgaggccatcgtggtgctggtgcgccagacctcgcacgtgcgcatc
acccgcgccctgcgctgcatcttcctcgtcgactgtcgctactgtggggctgtcagaaga
aatctgcgacagatcttccagtccctcccaccatttattgacatccttctcctcctgctt
ttcttcatggtgatttttgctattctgggtttttacttgttttctcctaaccactcggat
ccatacttcaataccttagagaacagtctggtgaatctctttgtgcttttgaccacttca
aatttccctgacgtgatgatgccgtcctacgcccggaacccctggtcctgtgtcttcttc
atcgtgtacctctccattgagctctacttcatcatgaacttgcttctggctgttgtgttt
gacactttcaacgacattgagaagaggaagttcaagtccctgctgctgcacaagcgcacg
gccatccagcacgcgtaccggctgctggtcaccaaacagaggccgtctggaatttccttc
aagcacttcgaagggctgctgcggttctacaagcctcggatgtgcgccagggagcgatat
ctcaccttcaaagcactgaaccagagcaatacccctttagtcagtctaaaggatttttac
aatttctatgaagttgttggcttaaaatggaaggcaaaacggaaccgcgagcactggttt
gatgaccttccgcggactgccttccttatttttaaaggcatcaacatcctggtgaagtcc
cgtgtgttccagtacactatgtacactgtggtggctgtgaatggaatttggattcttgtt
gaaaccttcatgctgcagggagggaatttcttctccaggaatgtcccgtggagctacata
gtcttcctcacaatctatggcgtggagctgctcctgaagaccactgggctggggcctgtg
gagtacctgtcctcaggctggaatctctttgacttctcagtcaccctgtttgcatttctg
gggctcatggcactggcgtttaacatggagcccttttacttcatcgtggtcctgcgaccc
ctccagctgctgaggctgttcaaactgaagaaacgctacaggaacgtcctggacaccatg
tttgagctgttccctcgcatggccagcctgggtttaaccctgctgatcttctactattgc
tttgccatcgttggcatggagttcttcgctggcgtggtctacccgaactgctgcaacaca
agcactgtcgcagattcctaccgctgggtgaaccacaccgttggcaacaaaacagttgtg
gaggaaggttattactatctcaacaactttgacaacattctgaacagctttgtgacgctg
tttgagctgacggtggtcaatgactggtacatcatcatggaaggggtgacatcccaaacc
actcactggagccgtctgtacttcatgaccttctacattgtgaccatggtggtgatgacc
atcatcgtggctttcatcctggacgcttttgtcttccgcatgaactacacccggaagaac
caggattcagaagaagataatggcattgtgctggagaaggagatctccaaggaggaggtg
attggcataattgagctgtacaagaggacttcagctgccactgaaacagctcagctgcag
aagatcgtgttgcagatggacaaatacgggcaaatgtccacggtgtttctgggacgcagg
tcgaggaccaagagcgatctgagcatgaagatgtatgaggaggagatacaggaatggtac
gaggagcactccaggaaagaggaatctcagacaccactgcaagagcctgcatctgcttcc
agcagctctctgaagcccctgagcctccggcagcgctcccagactgtcatttag
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