Hirundo rustica (Barn swallow): 120761528
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Entry
120761528 CDS
T09369
Name
(RefSeq) putative nuclear envelope pore membrane protein POM 121B
KO
K14316
nuclear pore complex protein Nup121
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120761528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120761528
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120761528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
120761528
NCBI-ProteinID:
XP_039938777
LinkDB
All DBs
Position
19:10942385..10954286
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AA seq
1234 aa
AA seq
DB search
MPGPLGAPPITQLGAPLTAEAPPHRATPHADSREACCDRPALSLSPAHLRAWMAAALPLK
LRPLVSFRPAFLARPAHPPRPAEHAGSGGRAAMAGAGPGGRRDGAVRTALAVAAALALAL
AWLLLRGALLGAAALGAAGAWCAMRPGPPAPRPPARVSKGEVGVERARKPQTSSEAPTLL
CLHRVRRCRPQAPRRRYPLPEGRPAVPLCLPAARWEGGSPRSAPWARRAAPLRSPVTVRI
APPTVGIARSPALEQLVSPLAFPATSSSDPCAKETVLNAIRESRKRAVEEEEEDQTFGND
QESKRRRHDSSGSGQSAFEPLIANGAPASLIPKPGSLKRGLISHCPDDCSNKRSRTSSMS
SLNNTYAGIPSSIRNAIASSYSSSRGLTQLWKRSGVSVSPLSSPASSRPQTPEWPLKKAR
EEELHRSSTSTPAKSDKELQTEKVVESPVWKKRNSLSPPSTSGSSGTRKRKIPLLSSLRG
DQLVLPPPPQLGFSITSEDLDAEKKAVLQWFNSVLEDKSDAVPSTTAEMMPVSKPLVFAV
TSTGPMPASTASALASSSPLDSLKKMQRSQAVSTAPDSTGPVAASQPPPSTAQSPAPAVS
LESSSLPAISADTKPVPVLSTPAPSASPALAGQPPSSLAPPVFTELGQTPSKPPSFPKPS
ILFGMLNTPPASQPAVPAAAAAPTASTAASTAASTAASTAVPTTATAVPTTAPVFKPIFG
AVPKSENTAACTAVNSTTATVSASSGLASTSSTSSIFKPIFGNVTAASSPAEVSSFTFSP
MAQTASEPPTASTATLAGFMGLPNVIFTTAATTAATQSSSTDATVKPVFSFGLNSPASTG
PAPSVTVTAATSTSTTQPFLFGGLAGSAPSTDTSFATSGPVFQFGKPPPVTVTATTSVPG
GPAFGQVLSNSTVAATTVGFSIFGSATLTSSAPATTTQAPLTFGSSVSAFGSFSASAKLP
PPYPGTGSQLTFSTGATESQVPASKPAAGPISLTPSFSFGAPPAQSVAQPAFGSGAQPVF
GTASGQGSFGASSTQAAFGTTTSVFSFGTATSTTSSFGATTQTTSSSTSTTVFATTPSLF
TFGATTQPGPSTSTFGMGTPGLSSGSPTVAFSFGAGQSGSAPAATPFGSSLPQSALGAQG
QSTPFAFTMTSTPNSKPAFGGAPVPTFGQSTPVPGAVGSGSSTLSFRTPSTPASSFGGVG
TSFGSSAPTFSIGAGSKTGTRQRLQARRQHTRKK
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgccgggccccctgggagccccgcccatcacgcagctgggagcgccgctcaccgcagag
gctccgccccatcgagccacgccccatgctgactcacgggaggcgtgttgcgatcgcccc
gccctatcgctaagccccgcccacctacgtgcctggatggcggccgcgcttcctctaaag
ctccgcccgctcgtgagcttccgcccggctttcctggcccgccccgcccacccgccccgc
cccgcagagcacgccgggagcggcgggcgcgcggcgatggcgggcgccgggccgggcggg
cggcgggacggggccgtgaggaccgcgctggccgtggccgccgcgctggcgctcgccctg
gcctggctgttgcttcggggcgcgctgctgggcgcggcggcgctgggcgcggcgggcgcc
tggtgcgccatgcggcccggcccccccgcgccgcgcccgcccgcaagggtaagcaagggg
gaggtgggggtagagcgggcgcggaagccccagacctcgtcggaggcgccgaccttgctc
tgtctccacagggttcgtcgctgccggccgcaggccccgcgccgccggtacccgctgcct
gagggccggccggccgtgccgctgtgcttgcccgccgcccgctgggagggcggctccccc
cgtagcgcgccttgggcccgccgtgccgccccgctccgcagccccgtcactgtgagaatc
gccccgccgaccgtcggcatcgcccgctccccggctctcgagcagctggtctcacctctg
gccttcccggctactagcagctctgacccgtgtgcaaaggagactgtgctgaatgccatc
agggagagccggaaaagggctgtggaggaggaggaggaggaccagacgtttgggaatgat
caggagagcaaaagaaggcgccacgacagcagtggaagcgggcagtcagcatttgagcca
ctgatagccaatggtgcccctgcttctctcatacccaagccaggctctctgaagaggggc
ctcatctcacactgcccagatgactgctccaacaagaggtctcgcacctcctccatgagc
tccctcaacaacacctacgctgggatccccagctccatccgcaatgccattgccagctcc
tacagctccagccggggcctcacacagctgtggaagagaagtggtgtgagcgtgtcccct
ctgtccagcccagcgtcctcccgccctcagacaccagagtggcctctcaagaaagccagg
gaagaggaattacatcgttccagcacttccaccccagcaaaatcagacaaggagctccag
acagagaaagtggtggagtcaccagtgtggaagaagcggaattccctgagcccaccgtcc
acctcagggagcagcgggacacgcaagcgaaagatcccgttgctgtcgtctctccgtggg
gaccagctggtgctgcccccgccacctcagctgggcttttccatcacctcagaggacctg
gacgcagagaagaaggcagtgctgcagtggttcaacagtgtcttggaggataagtctgat
gcagtccccagcaccactgcagagatgatgcctgtgtccaagccactggtgtttgctgtg
acctccactgggcctatgcctgcctccacagcttctgccctggccagctcttcgccccta
gacagcctgaagaagatgcagaggagccaggctgtatccacagcaccagactccactgga
cctgtggcagcatcccaaccacctccatcaactgcacagtcccctgctcctgctgtgtca
ttggagtcgagctctctgcctgccatctctgctgacaccaagcctgtgcctgtactgagc
acacctgcccccagtgcttcccctgcactggcagggcaaccccccagcagcctggccccg
cctgtgttcactgagctgggccagacccccagcaagcctccctccttcccaaagccaagc
atcctgtttgggatgctgaacacccctccagccagccagccagcagtgcctgcggctgct
gctgcacccactgcatccacagctgcatccacagctgcatccactgctgcatccactgct
gtgcccaccacagccactgctgtgcccaccacagcccccgtcttcaaacccatctttggt
gctgtcccaaagagtgagaacacagcagcctgcactgctgtcaattccacaacagccact
gtgtctgcaagctcaggccttgcctcaacgtcctccacatcctccatattcaagcccatc
tttggcaacgtcactgcagcttcatctccagcggaagtctcttctttcaccttcagtccc
atggcacagacagcttcagagccaccaactgcctccacagctactctggcaggattcatg
ggtcttcccaacgtcatcttcaccactgcagctacaactgccgccacccagagttcctcc
acggatgctaccgttaaacctgtcttcagctttggactgaactcgcctgcttccactggc
cctgcccccagcgtgactgtcaccgctgccacctccaccagcacaacccagcccttccta
tttgggggcctcgctggctcagctcccagcacagacaccagctttgccacctcagggcct
gtgttccagtttgggaagccgcctccagtcacagtcactgccaccacgagtgtccctgga
ggccctgcctttggccaggtactttcaaactcgacagtcgccgccaccaccgtgggtttt
agcatatttgggagtgcgacactgacctcctctgccccagccaccacaactcaagcacca
ctgacatttggctcctccgtttcagcttttggcagcttttcagccagtgcaaagctgccg
ccaccataccccggcactgggagccagctcaccttcagcaccggggctactgagagccag
gtgcctgccagcaagcctgctgctggccccatcagcttgacaccctcattcagttttgga
gcccccccagcacagtcagtggctcagccagcatttggcagcggtgcccagccagtcttc
ggtacagccagtggccagggctcctttggtgccagcagcacccaggctgcgttcgggacc
accacctcagtgttctcttttggaacagccacctccaccacatctagctttggtgccacc
acccagaccacaagcagcagcaccagtaccactgtctttgccaccaccccatctctattc
accttcggggccaccacccagccaggcccctccaccagcacctttgggatgggtacgccg
ggcctcagcagtgggtcccctactgtggccttcagctttggggctgggcagagcgggtca
gccccggcagcaacaccctttggctcatctctgccacagagtgcactgggagcgcagggc
cagagcacgcccttcgccttcaccatgaccagcactcccaacagcaaaccagcatttgga
ggagctccagtgcccacctttgggcagagcacacctgtccctggagctgtgggcagtgga
agcagcaccctttccttcaggacacccagcactcctgcctcaagctttggaggagtcggc
acttcctttggttcatccgctcccaccttctccatcggggcaggatctaagacgggcact
cgccagcggctgcaggcacggaggcagcacacccgcaaaaagtaa
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