Hirundo rustica (Barn swallow): 120762248
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Entry
120762248 CDS
T09369
Symbol
AGRN
Name
(RefSeq) agrin
KO
K06254
agrin
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04512
ECM-receptor interaction
hrt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120762248 (AGRN)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120762248 (AGRN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hrt00535
]
120762248 (AGRN)
Proteoglycans [BR:
hrt00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
120762248 (AGRN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
CFAI_KAZAL
Laminin_EGF
EGF
SEA
Laminin_G_3
hEGF
EGF_CA
Motif
Other DBs
NCBI-GeneID:
120762248
NCBI-ProteinID:
XP_039940398
LinkDB
All DBs
Position
22:complement(6091507..6195913)
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AA seq
2095 aa
AA seq
DB search
MGTRRAAGGREVLALLLALALGSGSGSGSASCPERELERREEEANVVLTGTVEEIMNVDP
VHHTYSCKVRVWRYLKGRDVVTHEILLDGGNKVVIGGFGDPLICDNQVATGDTRIFFVNP
APRALWPAHRNELMLNSSLMRITLRNLEEVEHCVEEHRKLLADKPNSYFTQTPPTPRDGC
RGMLCGFGAVCERSPSEPGQASCVCRKGPCAPVVAPVCGSDHSTYSNECELDRAQCNQQR
RIKVVSKGPCGSKDPCAEVTCSFGSTCVPSADGQAAKCVCPSSCAGVAESAVCGSDGRDY
RSLCHLNKHACDKQENVFKKFDGPCDPCGGVPPEPGRVCRVNPRTRRAELLPRPEGCPPG
GDPVCGDDGVTYDSECAMGRSGALRGMDIQKVRSGQCQQQDKCKDECKFNAVCLNRRGAA
RCSCDRAACDGAFRPLCGRDGRTYGSDCERRSAECRQQQHIPVKHSGPCDLGAPSPCRSV
ECSFGASCVVKNQEAVCECQQQCQGRYDPVCGTDQRTYGNPCELHAMACLLQRDIGVRHK
GPCDRCGKCQFGAICEAESGRCVCPTECVPSARPVCGTDGNTYGSECELHVRACTRQQDI
RVASQGRCRSCGGSVCSFGGRCVGGRCLCPRCERPRPAPVCGTDGVTYGSPCQLRAAACQ
LQRSIEVARTGPCEDECGSGGSGSGDGSECEQERCRQFGGWWDEDAEDERCVCDFTCLAV
PRGPVCGSDGVTYANECQLKKARCEKRQELFVTGQGACRALATAPPPPLVVHCSQTVYGC
CPDNVTLALGVGAAGCPSTCQCNPYGSYGGSCDPGSGQCSCKPGVGGLKCDRCEPGFWNF
RGIVTDGKSGCTPCHCDPVGSVRDDCEQMTGLCSCRTGITGMKCNQCPNGSKLGTTGCEK
DPSAPRSCRELSCDFGASCVEVNGFAHCECPSPLCSEANMTKVCGSDGVTYGDQCQLQTI
ACRQGQRITVKHVGQCHEPLTHSSPPLPPTPPPTPPPDRLLLPAPPRAAAPSPEPPTAAT
GPPPAGPTERGHGVTPAGPATATPRLAQATPEATVRPLATVPVVAATGRPGYGESGSAEG
SGDQDAGTSGDQESSGAGSAGEEEPDEGAVTATAAVERATCYNTALGCCSDGKTAAADAE
GSNCPATKVFQGVLILEEVEGQELFYTPEMADPKSELFGETARSIESALDELFRGSDVRK
DFKSIRVRDLGQSSAVRVIVEAHFDPATSYTAADIQGALLKQIRASKKKTILVKKPQQEH
IKFMDFDWIPQLFATTITTTTATTASPATTHRVPASPAATHRVPAATTRRVPAATTHRVP
AAPATTRHPAGGSGAPGPGGSGRRKPPGSTRQPPGGSRAPRPCQSQPCLHGGTCEDDGRD
FTCSCPAGRGGAVCEKAVRYFIPSFGGRSYLAFKTMKAYHTVRISMEFRALEPSGLLLYN
AQKHGKDFISLALVGGFVELRFNTGSGTGTVSSRVRVEPGRWHQLEVTRNRRSGALAVDG
EPQVSGHSPPGTDGLNLDTDLFIGGAPDEHMALVTERTEAAAGLRGCVRLLGINNRHYEL
RQGAGDVLYGSAVGECGDDPCQPNPCRHGGACHAKEAEMFRCQCPDGYTGPTCAFERNPC
EPSPCHASATCLVLPERGALCACPMGRQGEFCERVTEQDQSMPFLPEFNGFSFLELNGLQ
SFVPDLQEKMSMELVLLAKKPSGMIFYNGQKSDGKGDFVSLALHEGHLEYRYDLGKGPAV
LRSKERVPLNTWISVLLERSGRKGVLRVDDGDRVTGESPKSRKVPHMVLNLKEPLYVGGA
PDFSRLARAAAISSGFEGALQKISLGGVPLLKEQNIRSAREISPFRGHPCTQRPAPCRHG
GSCSPSMGGYRCSCPRGFSGTHCDRVIIEKAAGDAEAVAFDGRTYLEYHNAVTKSRLSNE
IPAPEALDFPREPSEKALQSNHFELSIKTEATQGLLLWSGKGLEKSDFIALAIVDGFVQL
SYDLGSKAVTLRSTVPVNTNQWIHIKASRVQREGSLQVGNEAPIAGSSPLGATQLDTDGA
LWLGGLDKASARPRLPKAFSTAFVGCMRDVQVDRRELHLLEDALNRPRILHCSAK
NT seq
6288 nt
NT seq
+upstream
nt +downstream
nt
atggggacacggcgggccgccggcggccgggaggtgctggcgctgctgctggcgctggcg
ctgggatcgggatcgggatcgggatcggcgagctgccccgagcgggagctggagcgcagg
gaggaggaggccaacgtggtgctcacgggcacggtggaggagatcatgaacgtggacccg
gtgcaccacacctactcgtgcaaggtgcgggtgtggcgctacctgaagggcagagacgtc
gtcacgcacgagatcctgctggatgggggcaacaaggtggtgatcgggggcttcggggac
ccgctgatctgcgacaaccaggtggccacgggcgacacgcgcatcttcttcgtcaacccc
gcgccgcgggcgctgtggccggcgcaccgcaacgagctgatgctcaactccagcctgatg
cgcatcacgctgcgcaacctggaggaggtggagcactgcgtggaagaacataggaagctt
ctcgccgacaaacccaacagttacttcacgcagacgccgccgacgccgcgagatggctgc
cgggggatgctgtgcggtttcggggccgtgtgcgagcgcagcccctcggagccgggccag
gcctcgtgcgtgtgcaggaagggtccctgcgcgcccgtggtggccccggtgtgcggctcc
gaccactccacctacagcaacgagtgcgagctggacagggcccagtgcaaccagcagagg
aggatcaaggtggtcagcaagggcccctgcggctccaaggacccctgcgcggaggtgacc
tgcagcttcggcagcacctgcgtcccctctgccgacggccaggccgccaagtgcgtgtgc
ccctcgtcgtgcgccggcgtcgccgagagcgccgtgtgcggcagcgacggccgcgactac
cgcagcctgtgccacctcaacaagcacgcctgcgacaagcaggagaacgtcttcaagaag
ttcgacggcccctgcgacccctgcggcggcgtcccgccggagccgggccgcgtgtgccgc
gtgaacccgcggacgcggcgcgccgagctgctgccgcggcccgagggctgtcccccgggc
ggggaccccgtgtgcggcgacgacggcgtcacctacgacagcgagtgcgcgatggggcgc
tcgggggccctccggggcatggacatccagaaggtgcgctcggggcagtgccagcagcag
gacaagtgcaaggacgagtgcaagttcaacgccgtgtgcctgaaccgccgcggcgccgct
cgctgctcctgcgaccgcgccgcctgcgacggagccttccggcccctgtgcgggcgcgac
ggccgcacctacggcagcgactgcgagcgccgcagcgccgagtgccggcagcagcagcac
atccccgtcaagcacagcgggccctgcgacctgggcgctcccagcccctgccggagcgtg
gagtgctccttcggcgccagctgcgtggtgaagaaccaggaggctgtgtgcgagtgccag
cagcagtgccagggccgctacgaccccgtgtgcggcaccgaccagcgcacctacggcaac
ccctgcgagctgcacgccatggcctgcctgctgcagagggacatcggcgtccggcacaag
gggccctgcgaccgctgcggcaagtgccagttcggcgccatctgcgaggcggagagcggg
cgctgcgtgtgccccaccgagtgcgtgccctcggcgcggcccgtctgcggcaccgacggc
aacacctacggcagcgagtgcgagctgcacgtccgcgcctgcacccggcagcaggacatc
cgcgtggcctcgcagggccgctgccggtcgtgcggcggctccgtgtgctccttcggcggg
cgctgcgtgggcgggcgctgcctgtgcccgcgctgcgagcgcccgcgcccggccccggtc
tgcggcaccgacggcgtcacctacggcagcccctgccagctgcgggccgccgcgtgccag
ctgcagaggagcatcgaggtggccaggacgggaccctgcgaggacgagtgcggctcgggg
ggctccggctcgggggacggcagcgagtgcgagcaggagcggtgccggcagttcggcggc
tggtgggacgaggacgccgaggacgagcgctgcgtgtgcgacttcacgtgcctggcggtg
ccgcgcggcccggtgtgcggctccgacggcgtcacctacgccaacgagtgccagctgaag
aaggcgcggtgcgagaaacgccaggagctctttgtcaccggccagggagcgtgtcgggcc
ctggccaccgcgccgccgccgccgctggtcgtgcactgcagccagaccgtctacggctgc
tgcccggacaacgtcacgctggcgctgggcgtgggagcggccggatgtcccagcacgtgc
cagtgcaacccctacggctcctacggcggctcctgcgacccgggctcggggcagtgctcc
tgcaagcccggcgtgggcggcctcaagtgcgaccgctgcgagcccggcttctggaacttc
cgcggcatcgtcaccgacggcaagagcggctgcaccccctgccactgcgaccccgtgggc
tcggtgcgggacgactgcgagcagatgacggggctgtgctcctgcaggacgggcatcacg
ggcatgaagtgcaaccagtgccccaacggcagcaagctgggcaccacgggctgcgagaag
gacccctccgccccgcggtcctgccgggagctgagctgtgacttcggggcctcgtgcgtg
gaggtgaacggctttgcgcactgcgagtgcccgtccccgctctgctccgaggccaacatg
accaaggtgtgcggctccgacggtgtcacctacggggaccagtgccagctgcagaccatc
gcctgcaggcagggccagcgcatcacggtcaagcacgtggggcagtgccacgagcccctg
acccacagcagccccccgctgccccccacgccgccgcccacgccgccgccggaccggctc
ctgctgcccgcgccgcctcgtgccgccgcgccgtccccggagccacccaccgcggccacc
ggcccgccgccggccgggcccacggagcgcgggcacggcgtgacaccggccgggccggcc
accgccacaccccggctcgcccaggccacgcccgaggccaccgtccgcccgctggccacc
gtgcccgtggtggcggccaccggccggccgggctacggcgagtccggcagcgccgagggc
agcggggaccaggacgcgggcaccagcggcgaccaggagtccagcggggcgggatcggcc
ggtgaggaggagccggacgagggagcggtgacggccacggccgccgtcgagagggccacg
tgctacaacaccgccctgggctgctgctccgacgggaaaaccgccgccgccgacgccgag
gggagcaactgcccagccaccaaagtgttccaaggagtgctgatcctggaggaggtggag
ggccaggagctgttctacaccccggagatggccgaccccaaatccgagctcttcggggag
acggcgcggagcatcgagagcgcgctggatgagcttttccggggttccgacgtcaggaag
gatttcaagagcatccgagtgcgggacctgggccagagcagcgccgtcagggtcatcgtg
gaggctcactttgacccagccacgtcctacacggccgccgatatccagggagctctgctg
aagcagatccgagcttccaagaagaaaaccatcctggtgaagaagccgcagcaggagcac
atcaaattcatggattttgactggatcccgcagctcttcgccaccaccatcaccaccacc
acggccaccaccgcgtccccggccaccacccaccgtgtccccgcgtccccggccgccacc
caccgtgtccccgcggccaccacccgccgtgtccctgcagccaccacccaccgtgtcccc
gcggccccggccaccacccgccatcccgcgggcggctccggggcgcccggccccggcggc
agcggcaggaggaagccccccggcagcacccggcagccccccggcggcagccgagccccc
cggccctgccagtcccagccctgcctgcacggtggcacctgcgaggacgacggccgcgac
ttcacctgcagctgccccgcggggagaggaggggccgtctgtgagaaagccgtcaggtac
ttcatccccagcttcgggggcaggtcctacctggccttcaagaccatgaaggcctaccac
acggtgaggatttccatggaattccgggccctggagcccagcgggctgctcctctacaac
gcccagaagcacggcaaggatttcatctcgctggcgctggtgggcggcttcgtggagctc
aggtttaacacgggctcgggcacgggcacggtgagcagcagggtccgggtggagccgggc
cgctggcaccagctggaggtgacccggaaccggcgcagcggcgccctggccgtggacggg
gagccccaggtcagcgggcacagccccccgggcaccgacgggctcaacctggacaccgac
ctcttcatcggcggggcgcccgacgagcacatggcgctggtgacggagcgcaccgaggcc
gccgccggcctgcggggctgcgtccgcctcctgggcatcaacaaccgccactacgagctg
cgccagggcgccggcgacgtcctctacggcagcgccgtgggcgagtgcggcgacgacccc
tgccagcccaacccctgccgccacggcggcgcgtgccacgccaaggaggccgagatgttc
cgctgccagtgccccgacggctacacgggccccacgtgcgccttcgagaggaacccgtgc
gagccgtcgccgtgccacgcctctgccacctgcctggtgctgcccgagcggggcgcgctg
tgcgcctgccccatggggcgccagggggaattctgcgagcgagtgacggagcaggaccag
tccatgcccttcctgcccgagttcaacggattctccttcctggagctgaacgggctgcag
agcttcgtgcccgacctgcaggagaagatgtccatggagctggtgctgctggccaagaag
cccagcgggatgatcttctacaacggccagaagagcgacggcaaaggggactttgtgtcc
ctggcgctgcacgaggggcacctggagtacagatacgacctgggcaaggggccagccgtg
ctcaggagcaaggagcgggtgcccctcaacacctggatcagcgtgctgctggagaggagc
ggccgcaagggcgtcctgagggtggacgacggcgacagggtgacgggagagtccccgaaa
tcccgtaaggtgccccacatggtgctgaacctgaaggagccgctctacgtggggggagcc
cccgatttctccaggctggcccgggcggctgccatctccagcggcttcgagggggctctg
cagaagatctctctggggggcgtgcccctgctgaaggagcagaacatccgcagcgcgcgg
gagatctccccgttccgcgggcacccctgcacgcagcgccccgcgccctgccggcacggc
ggctcctgcagccccagcatgggcggctaccgctgctcctgcccgcgcggcttctcgggg
acgcactgcgacagagtgatcatcgagaaggcagctggggatgctgaggccgtcgccttc
gatggccggacgtacctggagtaccacaacgccgtcaccaagagccgcctgagcaatgag
atcccagctcccgaggcgctggatttcccccgggagcccagcgagaaggccctgcagtcc
aaccacttcgagctcagcatcaaaaccgaggccacgcaggggctgctcctgtggagcggg
aaggggctggaaaagtcggatttcatcgccctggccatcgtggatggcttcgtgcagctc
agctacgacctgggctccaaagccgtcaccctgcgctccacggtgcccgtcaacaccaac
cagtggatccacatcaaagcctccagggtgcagcgggaagggtccctccaggttgggaac
gaggcgcccatcgccggctcctctcctctcggggccacccagctggacacggacggggcg
ctgtggctgggcgggctggacaaggcgagcgcgcgcccgcggctgcccaaggcgttcagc
acggccttcgtgggctgcatgcgggacgtgcaggtggatcggcgcgagctgcacctgctg
gaggacgcgctcaaccgcccgcggatattgcactgctcggccaaatag
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