Homo sapiens (human): 140886
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Entry
140886 CDS
T01001
Symbol
PABPC5, PABP5
Name
(RefSeq) poly(A) binding protein cytoplasmic 5
KO
K13126
polyadenylate-binding protein
Organism
hsa
Homo sapiens (human)
Pathway
hsa03015
mRNA surveillance pathway
hsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140886 (PABPC5)
09123 Folding, sorting and degradation
03018 RNA degradation
140886 (PABPC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsa03019
]
140886 (PABPC5)
03041 Spliceosome [BR:
hsa03041
]
140886 (PABPC5)
Messenger RNA biogenesis [BR:
hsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
140886 (PABPC5)
mRNA cycle factors
Stress granule specific factors
140886 (PABPC5)
Spliceosome [BR:
hsa03041
]
Complex C
Other components
Complex C specific factors
140886 (PABPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_7
RRM_3
TC1
Motif
Other DBs
NCBI-GeneID:
140886
NCBI-ProteinID:
NP_543022
OMIM:
300407
HGNC:
13629
Ensembl:
ENSG00000174740
UniProt:
Q96DU9
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All DBs
Position
X:91434839..91438584
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AA seq
382 aa
AA seq
DB search
MGSGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLG
YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNR
ALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRF
KFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKG
FGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPP
GVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDE
MNGRIVGSKPLHVTLGQARRRC
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggggagcggggagcctaatcctgctggcaagaaaaagaagtatctcaaggccgctctg
tacgtgggtgacttggacccagatgtcaccgaggacatgctctataagaagttcaggcct
gctggccctctgcgattcacccgaatctgccgtgatccggtgacccgcagccccctgggc
tatgggtatgttaacttccgctttcccgcggatgcagagtgggccttgaacaccatgaat
tttgatttgattaatggaaaaccattccgccttatgtggtctcagccagatgaccgctta
agaaagtctggagtgggaaatatattcatcaaaaacctggacaaatccatagacaatagg
gccctgttttacttattttctgcttttgggaacattctgtcctgcaaagtcgtatgcgat
gacaacggctctaagggttatgcctatgttcactttgacagcctggccgctgccaataga
gccatctggcacatgaatggagtgcggctcaacaaccgccaggtgtatgttggcagattc
aaattcccagaagagcgggcggctgaggtcagaaccagggatagagcaactttcaccaat
gttttcgttaaaaacattggagacgacatagatgacgaaaaactgaaggaacttttctgt
gaatatgggccaactgagagtgttaaagtaataagagatgccagtgggaaatctaaaggc
tttggatttgtgagatatgagacacacgaggctgcccaaaaggctgtgctagacttgcat
ggaaagtccatcgatggaaaagtcctctatgtagggcgagcacagaagaaaattgaacgc
ctggctgagttgaggcggagatttgaacggctgaggttaaaagaaaaaagtcggccccca
ggggtgcctatctatattaagaacttggatgagacaatcaatgatgaaaaactgaaggag
gaattttcttcctttgggtcaattagtcgggccaaagtgatgatggaagtggggcaaggc
aaaggatttggtgtggtctgcttttcctcttttgaagaggctaccaaagcagtggatgag
atgaatggccgcatagtgggctccaagcccctgcatgtcaccctgggccaggccaggcgc
aggtgctga
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