KEGG   Homo sapiens (human): 27253
Entry
27253             CDS       T01001                                 
Symbol
PCDH17, PCDH68, PCH68
Name
(RefSeq) protocadherin-17 precursor
  KO
K16499  protocadherin 12/17/18, delta 2
Organism
hsa  Homo sapiens (human)
Pathway
hsa04519  Cadherin signaling
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    27253 (PCDH17)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsa04515]
    27253 (PCDH17)
Cell adhesion molecules [BR:hsa04515]
 Cadherins
  Protocadherins
   27253 (PCDH17)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_FAT4_N Cadherin_CELSR2_9th Ig_CLSTN Cadherin_C_2 NUC153 PepSY
Other DBs
NCBI-GeneID: 27253
NCBI-ProteinID: NP_001035519
OMIM: 611760
HGNC: 14267
Ensembl: ENSP00000367151.3
UniProt: O14917
Structure
LinkDB
Position
13:57630108..57729311
AA seq 1159 aa
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGRDARLQPGLPPAERGGGGRSK
SGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQLSLEVFANDKEICMIKV
EIQDINDNAPSFSSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHGLFG
LDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDGGEPPRSATVQINVKVIDSNDNS
PVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDPKT
GLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQGA
LSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGGPGGSVPFKLEENYDN
FYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFAIKILDENDNPPRFTKGLYVLQ
VHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRSF
NFEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRN
AGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPVVE
LVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDMSLPLIVTLSTISIILL
AAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERNAM
NVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHTSFTGQG
TNASETPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADS
DQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEPEECVNCTDECRVLGHSDRCWMPQFPA
ANQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYLK
AKRALSPLLQEVPSASSSPTKACIEPCTSTKGSLDGCEAKPGALAEASSQYLPTDSQYLS
PSKQPRDPPFMASDQMARVFADVHSRASRDSSEMGAVLEQLDHPNRDLGRESVDAEEVVR
EIDKLLQDCRGNDPVAVRK
NT seq 3480 nt   +upstreamnt  +downstreamnt
atgtacctttccatctgttgctgctttcttctatgggcccctgccctcactctcaagaac
ctcaactactccgtgccggaggagcaaggggccggcacggtgatcgggaacatcggcagg
gatgctcgactgcagcctgggcttccgcctgcagagcgcggcggcggagggcgcagcaag
tcgggtagctaccgggtgctggagaactccgcaccgcacctgctggacgtggacgcagac
agcgggctcctctacaccaagcagcgcatcgaccgcgagtccctgtgccgccacaatgcc
aagtgccagctgtccctcgaggtgttcgccaacgacaaggagatctgcatgatcaaggta
gagatccaggacatcaacgacaacgcgccctccttctcctcggaccagatcgaaatggac
atctcggagaacgctgctccgggcacccgcttccccctcaccagcgcacatgaccccgac
gccggcgagaatgggctccgcacctacctgctcacgcgcgacgatcacggcctctttgga
ctggacgttaagtcccgcggcgacggcaccaagttcccagaactggtcatccagaaggct
ctggaccgcgagcaacagaatcaccatacgctcgtgctgactgccctggacggtggcgag
cctccacgttccgccaccgtacagatcaacgtgaaggtgattgactccaacgacaacagc
ccggtcttcgaggcgccatcctacttggtggaactgcccgagaacgctccgctgggtaca
gtggtcatcgatctgaacgccaccgacgccgatgaaggtcccaatggtgaagtgctctac
tctttcagcagctacgtgcctgaccgcgtgcgggagctcttctccatcgaccccaagacc
ggcctaatccgtgtgaagggcaatctggactatgaggaaaacgggatgctggagattgac
gtgcaggcccgagacctggggcctaaccctatcccagcccactgcaaagtcacggtcaag
ctcatcgaccgcaacgacaatgcgccgtccatcggtttcgtctccgtgcgccagggggcg
ctgagcgaggccgcccctcccggcaccgtcatcgccctggtgcgggtcactgaccgggac
tctggcaagaacggacagctgcagtgtcgggtcctaggcggaggagggacgggcggcggc
gggggcctgggcgggcccgggggttccgtccccttcaagcttgaggagaactacgacaac
ttctacacggtggtgactgaccgcccgctggaccgcgagacacaagacgagtacaacgtg
accatcgtggcgcgggacgggggctctcctcccctcaactccaccaagtcgttcgcgatc
aagattctagacgagaacgacaacccgcctcggttcaccaaagggctctacgtgcttcag
gtgcacgagaacaacatcccgggagagtacctgggctctgtgctcgcccaggatcccgac
ctgggccagaacggcaccgtatcctactctatcctgccctcgcacatcggcgacgtgtct
atctacacctatgtgtctgtgaatcccacgaacggggccatctacgccctgcgctccttt
aacttcgagcagaccaaggcttttgagttcaaggtgcttgctaaggactcgggggcgccc
gcgcacttggagagcaacgccacggtgagggtgacagtgctagacgtgaatgacaacgcg
ccagtgatcgtgctccccacgctgcagaacgacaccgcggagctgcaggtgccgcgcaac
gctggcctgggctatctggtgagcactgtgcgcgccctagacagcgacttcggcgagagc
gggcgtctcacctacgagatcgtggacggcaacgacgaccacctgtttgagatcgacccg
tccagcggcgagatccgcacgctgcaccctttctgggaggacgtgacgcccgtggtggag
ctggtggtgaaggtgaccgaccacggcaagcctaccctgtccgcagtggccaagctcatc
atccgctcggtgagcggatcccttcccgagggggtaccacgggtgaatggcgagcagcac
cactgggacatgtcgctgccgctcatcgtgactctgagcactatctccatcatcctccta
gcggccatgatcaccatcgccgtcaagtgcaagcgcgagaacaaggagatccgcacttac
aactgccgcatcgccgagtacagccacccgcagctgggtgggggcaagggcaagaagaag
aagatcaacaaaaatgatatcatgctggtgcagagcgaagtggaggagaggaacgccatg
aacgtcatgaacgtggtgagcagcccctccctggccacctcccccatgtacttcgactac
cagacccgcctgcccctcagctcgccccggtcggaggtgatgtatctcaaaccggcctcc
aacaacctgactgtccctcaggggcacgcgggctgccacaccagcttcaccggacaaggg
actaatgcaagcgagacccctgccactcggatgtccataattcagacagacaattttccc
gcagagcccaattacatgggcagcaggcagcagtttgttcaaagtagctccacgtttaag
gacccagaaagagccagcctgagagacagtgggcacggggacagtgatcaggctgacagt
gaccaagacactaacaaaggctcctgctgtgacatgtctgttagggaggcactcaagatg
aaaactacttcaactaaaagccaaccacttgaacaagaaccagaagagtgtgttaattgc
acagatgaatgccgagtgcttggtcattctgacaggtgctggatgccacagttccctgca
gccaatcaggctgaaaatgcagattaccgcacaaatctctttgtacctacagttgaagct
aatgttgagactgagacttacgaaactgtgaatcccactgggaaaaagactttttgtaca
tttggaaaagacaagcgagagcacactattctcattgccaacgttaaaccttatttaaaa
gccaaacgtgccctgagccctctcctccaagaggtcccctcagcatcaagcagcccaacc
aaggcgtgcatcgagccttgcacctcaacaaaaggctccctggatggctgtgaagcaaaa
ccaggagccctggctgaagcaagcagtcagtacttgcccactgacagtcaatatctgtca
cctagtaagcaaccaagagaccctcccttcatggcttccgatcagatggcaagggtcttt
gcagatgtgcattccagagccagccgggattccagtgagatgggtgctgttcttgagcag
cttgaccaccccaacagggatctgggcagagagtctgtggatgcagaggaagttgtgaga
gaaattgataagcttttgcaagactgccggggaaacgaccctgtggctgtgagaaagtga

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