Homo sapiens (human): 5042
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Entry
5042 CDS
T01001
Symbol
PABPC3, PABP3, PABPL3, tPABP
Name
(RefSeq) poly(A) binding protein cytoplasmic 3
KO
K13126
polyadenylate-binding protein
Organism
hsa
Homo sapiens (human)
Pathway
hsa03015
mRNA surveillance pathway
hsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
5042 (PABPC3)
09123 Folding, sorting and degradation
03018 RNA degradation
5042 (PABPC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsa03019
]
5042 (PABPC3)
03041 Spliceosome [BR:
hsa03041
]
5042 (PABPC3)
Messenger RNA biogenesis [BR:
hsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
5042 (PABPC3)
mRNA cycle factors
Stress granule specific factors
5042 (PABPC3)
Spliceosome [BR:
hsa03041
]
Complex C
Other components
Complex C specific factors
5042 (PABPC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
RRM_occluded
MARF1_RRM1
YflT
RRM_3
Motif
Other DBs
NCBI-GeneID:
5042
NCBI-ProteinID:
NP_112241
OMIM:
604680
HGNC:
8556
Ensembl:
ENSG00000151846
UniProt:
Q9H361
Q5VX58
Structure
PDB
LinkDB
All DBs
Position
13:25096136..25099254
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AA seq
631 aa
AA seq
DB search
MNPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQ
HTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVS
AFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKERE
AELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKN
LDDGIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAYLTNEYMQRMASVRAVPNQRAPPSGYFMTAVPQTQNHAAYYPPS
QIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRPASSQVPRVMSTQRVANTS
TQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNPQQHRNAQPQVTMQQLAVHVQGQETL
TASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRS
KVDEAVAVLQAHQAKEATQKAVNSATGVPTV
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcacccccagctacccaacggcctcgctctacgtgggggacctccacccc
gacgtgactgaggcgatgctctacgagaagttcagcccggcagggcccatcctctccatc
cggatctgcagggacttgatcaccagcggctcctccaactacgcgtatgtgaacttccag
catacgaaggacgcggagcatgctctggacaccatgaattttgatgttataaagggcaag
ccagtacgcatcatgtggtctcagcgtgatccatcacttcgaaaaagtggagtgggcaac
atattcgttaaaaatctggataagtccattaataataaagcactgtatgatacagtttct
gcttttggtaacatcctttcgtgtaacgtggtttgtgatgaaaatggttccaagggttat
ggatttgtacactttgagacacacgaagcagctgaaagagctattaaaaaaatgaacgga
atgctcctaaatggtcgcaaagtatttgttggacaatttaagtctcgtaaagaacgagaa
gctgaacttggagctagggcaaaagagttccccaatgtttacatcaagaattttggagaa
gacatggatgatgagcgccttaaggatctctttggcaagttcgggcccgccttaagtgtg
aaagtaatgaccgatgaaagtggaaaatccaaaggatttggatttgtaagctttgaaagg
catgaagatgcacagaaagctgtagatgagatgaatggaaaggagctcaatggaaaacaa
atttacgttggtcgagctcagaaaaaagtggaacggcagacggaacttaagcgcacattt
gaacagatgaagcaagataggatcaccagataccaggttgttaatctttatgtgaaaaat
cttgatgatggtattgatgatgaacgtctccggaaagcgttttctccatttggtacaatc
actagtgcaaaggttatgatggaaggtggtcgcagcaaagggtttggttttgtatgtttc
tcctccccagaagaagccactaaagcagttacagaaatgaacggtagaattgtggccaca
aagccattgtatgtagctttagctcagcgcaaagaagagcgccaggcttacctcactaac
gagtatatgcagagaatggcaagtgtacgagctgtgcccaaccagcgagcacctccttca
ggttacttcatgacagctgtcccacagactcagaaccatgctgcatactatcctcctagc
caaattgctcgactaagaccaagtcctcgctggactgctcagggtgccagacctcatcca
ttccaaaataagcccagtgctatccgcccaggtgctcctagagtaccatttagtactatg
agaccagcttcttcacaggttccacgagtcatgtcaacgcagcgtgttgctaacacatca
acacagacagtgggtccacgtcctgcagctgctgctgctgctgcagctacccctgctgtg
cgcacggttccacggtataaatatgctgcgggagttcgcaatcctcagcaacatcgtaat
gcacagccacaagttacaatgcaacagcttgctgttcatgtacaaggtcaggaaactttg
actgcctccaggttggcatctgcccctcctcaaaagcaaaagcaaatgttaggtgaacgg
ctctttcctcttattcaagccatgcaccctactcttgctgggaaaatcactggcatgttg
ttggagattgataattcagaacttctttatatgctcgagtctccagagtcactccgttct
aaggttgatgaagctgtagctgtactacaagcccaccaagctaaagaggctacccagaaa
gcagttaacagtgctaccggtgttccaactgtttaa
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