Homo sapiens (human): 79008
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Entry
79008 CDS
T01001
Symbol
SLX1B, GIYD2
Name
(RefSeq) SLX1 homolog B, structure-specific endonuclease subunit
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
hsa
Homo sapiens (human)
Pathway
hsa03460
Fanconi anemia pathway
Network
nt06506
Double-strand break repair
nt06508
Interstrand crosslink repair
Element
N01448
Double Holliday junction resolution
N01465
Lesion bypass by TLS and DSB formation
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
79008 (SLX1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsa03400
]
79008 (SLX1B)
DNA repair and recombination proteins [BR:
hsa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
79008 (SLX1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
Motif
Other DBs
NCBI-GeneID:
79008
NCBI-ProteinID:
NP_076949
OMIM:
615823
HGNC:
28748
Ensembl:
ENSG00000181625
UniProt:
Q9BQ83
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All DBs
Position
16:29454533..29458220
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AA seq
275 aa
AA seq
DB search
MGPAGVAARPGRFFGVYLLYCLNPRYRGRVYVGFTVNTARRVQQHNGGRKKGGAWRTSGR
GPWEMVLVVHGFPSSVAALRFEWAWQHPHASRRLAHVGPRLRGETAFAFHLRVLAHMLRA
PPWARLPLTLRWVRPDLRQDLCLPPPPHVPLAFGPPPPQAPAPRRRAGPFDDAEPEPDQG
DPGACCSLCAQTIQDEEGPLCCPHPGCLLRAHVICLAEEFLQEEPGQLLPLEGQCPCCEK
SLLWGDLIWLCQMDTEKEVEDSELEEAHWTDLLET
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccgcgggggtcgcggcgaggccagggcgctttttcggcgtctacctgctctac
tgcctgaacccccggtaccggggccgcgtctacgtggggttcactgtcaacactgctcgt
cgggtccagcagcacaatgggggccgcaaaaaaggcggggcctggcggaccagcgggcga
gggccctgggagatggtgctcgtcgtgcacggcttcccgtcctccgtggccgcccttcgg
tttgagtgggcttggcagcacccgcacgcctcgcgccgcctggcgcacgtggggcctcgc
ctgcgaggagagacagccttcgctttccacctgcgcgtgctggcgcacatgctgcgcgca
ccgccctgggctcgcctcccgctcacgctgcgctgggtgcgcccagacctccgccaggac
ctctgcctcccgccgccgccgcacgtgcctctggccttcgggcctccaccgccccaggcc
ccggccccaaggcgccgcgcaggtccctttgatgacgcggagcctgagccagaccagggg
gatccaggggcctgctgctccctgtgcgcccagaccatccaggatgaagaggggcccttg
tgttgcccccaccctggctgcctgctaagggcccatgtgatctgcctggcagaggagttt
cttcaggaagaaccagggcagcttctgcccctagagggccaatgcccttgctgtgagaag
tcactgctttggggagacctgatctggctgtgccagatggacactgagaaagaagtagaa
gactcagaattagaagaggcacactggacagacctgctggagacctga
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