Haloterrigena salifodinae: JMJ58_07495
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Entry
JMJ58_07495 CDS
T07070
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hsal
Haloterrigena salifodinae
Pathway
hsal03022
Basal transcription factors
hsal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JMJ58_07495
09124 Replication and repair
03420 Nucleotide excision repair
JMJ58_07495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsal03021
]
JMJ58_07495
03400 DNA repair and recombination proteins [BR:
hsal03400
]
JMJ58_07495
Enzymes [BR:
hsal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
JMJ58_07495
Transcription machinery [BR:
hsal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
JMJ58_07495
DNA repair and recombination proteins [BR:
hsal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
JMJ58_07495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
ATPase
AAA_34
PhoH
Motif
Other DBs
NCBI-ProteinID:
QRV16703
UniProt:
A0A8T8E541
LinkDB
All DBs
Position
1535623..1537794
Genome browser
AA seq
723 aa
AA seq
DB search
MSETTGYMRFFPYDQPYENQREAMDRIHNSLTRGQDVLFEGACGTGKTLSSLVPALEVAR
EQDKTVVIMTNVHQQMRQFVAEARAITREEDIRAIVFKGKSSMCHIDVGYEECQALRDNT
RAVVDAERDKRQLERRQRELLEESQDGDGGAADARSAVMDELEDIEERLEDLAEQNVCDY
YRNNLTRDTDDFFAWLFEDVRTPEEIYEYAEREGFCGYELLKEGIEGVDLVVCNYHHLLD
SMIREQFFRWLGRDPEDVIAVFDEAHNVEDAAREHATRTCSERTFDSVLDELADADDPRS
EDAANVLSAFHRALVETYEDSFGFGERKRLDENWEDVPIANEDRKDDLTLEFLQRYSGRG
IEDDLEAAMKLGQELDEQYEEAYREGETATRTECQTLQAAAFVSAWMNEGSKEGLYPVVS
VTRDAGTDEIYGRAELYTCLPRQVTGQLFEEVYGTILMSATLQPFDVTEDVLGLEDPVTM
AYGLQFPEEHRRTYAVETPPLFSSDRDDPAVQTAVTDTIHDAVRMTPGNTLAFFPNYSEA
SRYAERLKGRTEKTVYLDEPGTAVEELRQQFVADDGAVLCTSLWGTLAEGVSFDGDDAHT
VLVVGVPYPHLDDRAEAVQEAYDAAFDGTETGWRYAVEIPTVRKTRQALGRVIRSPEDVG
VRALLDRRYSRSAKSDLGRYSVNGTFPHEEREELIDIDPEKLKFSMLNFYGDHDAYDGET
PAP
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgagacaaccgggtacatgcgctttttcccgtacgaccagccgtacgagaaccag
cgcgaggcgatggaccgcatccacaattcgctgacccgcggccaggacgtcctcttcgag
ggtgcctgcgggaccgggaagaccctctcgtcgctggtccctgccctcgaggtggcccgc
gagcaggacaagacggtcgtcatcatgaccaacgtccaccagcagatgcgccagttcgtc
gccgaagcccgcgcgatcacccgcgaggaggacattcgggcgatcgtcttcaaggggaaa
tcctccatgtgtcacatcgacgtcggctacgaagagtgccaggcgctccgggacaacacc
cgcgccgtcgtcgacgccgaacgcgacaagcgacagctcgagcgccgccagcgcgaacta
ctggaggaaagtcaggacggcgacggcggcgcggccgacgcccgctcggcggtgatggac
gaactcgaggacatcgaggagcgactcgaggacttagcagagcagaacgtctgcgactac
taccggaataatctcacccgggatacggacgacttcttcgcgtggctcttcgaggacgtc
cggacgccggaggagatctacgagtacgccgagcgggagggcttttgcggctacgaactg
ctgaaggaggggatcgagggcgtcgacctggtcgtctgtaactaccaccacctgctggac
tcgatgatccgcgagcagttcttccggtggctcggccgggatccggaggacgtcatcgcc
gtcttcgacgaggcccacaacgtcgaggacgcggcccgcgaacacgccacccggacctgc
tccgagcggaccttcgactccgtgctcgacgagttggccgacgccgacgacccgcgatcc
gaggacgccgccaacgtcctctcggcctttcaccgtgcgctcgtcgagacctatgaggac
tccttcggcttcggggagcgcaagcggctcgacgagaactgggaggacgtccccatcgcc
aacgaggaccggaaggacgacctcacgctcgagttcctccaacgctactcgggtcgaggg
atcgaggacgacctggaggccgcgatgaagctcggccaggagttagacgagcagtacgag
gaggcctaccgagaaggcgagaccgccacgcggaccgagtgtcagaccctgcaggccgcc
gcgttcgtcagcgcctggatgaacgagggaagcaaggaggggctctaccccgtcgtctcc
gtcactcgagacgcaggtaccgacgagatctacggccgcgcggaactgtatacctgtctc
ccccgccaagttacgggccaactgttcgaggaggtgtacgggacgatcctgatgagcgcg
acgctgcagcccttcgacgtcaccgaggacgtgctcggcctcgaggaccccgtcaccatg
gcctacgggctccagttccccgaggagcatcggcgcacctacgccgtcgagacgccgccg
ctgttctcgtcggaccgagacgatcccgcggtccagacggcggtgaccgacacgatccac
gacgccgtccggatgacgccggggaacacgctcgccttcttccccaattacagcgaggcg
agtcgctacgccgagcgactcaaggggcgaaccgaaaagacggtctatctggacgagccc
ggaaccgccgtcgaggagttacgccagcagttcgtcgcggacgacggcgccgtgctctgt
acctcgttgtggggaacgctggcggagggcgtcagtttcgacggcgacgacgcccacacg
gtgctggtcgtcggcgttccgtacccccacctcgacgatcgcgccgaggcggttcaggag
gcctacgacgcggcgttcgacgggaccgagacgggctggcgctacgccgtcgagatcccg
acggttcgcaagaccagacaggcactcggtcgggtcatccgttcgccggaggacgtcggc
gtccgggctctactcgatcggcgctactcgcggtcggcgaagtcggacctgggtcggtac
agcgtcaacggcaccttcccccacgaggagcgcgaggaactgatcgacatcgaccccgag
aagctgaagttttcgatgctgaacttctacggcgaccacgacgcctacgacggcgagacg
ccggcgccctag
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