Herbinix luporum: SD1D_0560
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Entry
SD1D_0560 CDS
T04072
Name
(GenBank) putative secreted protein
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
hsd
Herbinix luporum
Pathway
hsd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SD1D_0560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsd02000
]
SD1D_0560
Transporters [BR:
hsd02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
SD1D_0560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
CUH92112
UniProt:
A0A0K8J3P8
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Position
I:587238..588890
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AA seq
550 aa
AA seq
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MKKKLLSILLICTLIVSVLGGCGTKSDNKDGGNDKTEPTKAPVESGDDKPEYAEITVEIF
DRGTDGGKTDPANNFYTDWIKEKVKEELNIGVTFVPVSRWEETEQLNNLMAANTAPDVCL
TYSGDLIANYRDLGGLADLAPYIDSHLPDLKAFLGPDPAVPGHDLIYRNMDTETGAVYSI
PARRMNVAQIGTFIRKDWLDKLGLPLPTTTEEFYEALVAFKEQDPGGVGKDKVVPFTMTS
DIRWRAATLIESFIDPNLSDKDRWINTVVDRYYLLPGYKEGVRFLNKMYNEGLIDNQFAL
YKDDTDSDNLIKMGVAGAFIHNWDQPYRETPGLLKDLQENVPEAEIVSIDPFQNANGVTE
KSLYDVAGVNFFVPASSKNVEAALRYINWLSKFENRYFLQIGEEGVTHEMVDGIPKIIAA
EGEKIMNSQQNIDYTIMINGLDVGDEEKNAKALAFSYPVEPDLIVKAYEDATRNGRSAIV
IPVILSAAGPYTQTLIDKGNELMAKSVTAAPEDFDKVWDAGIEEWLASGAQEIIDERAAK
YEEYEASLNN
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaattgttgtcaatcttgcttatatgcactttgattgtcagcgtcttaggg
ggatgtggtactaaaagtgataacaaagacggtggcaacgacaaaacagagcctacaaag
gcacctgtagagtcaggtgatgataagcctgagtatgctgaaatcacagttgaaatcttc
gatcgtggtactgacggcggtaagactgacccagctaataacttttataccgattggata
aaagaaaaagttaaagaagagcttaatattggggtaactttcgttccggtatcccgttgg
gaagaaacagagcagcttaataacttaatggctgcaaatactgctcctgatgtatgtcta
acatacagcggtgacttaattgctaactatcgtgatttaggtggtcttgcagatttggct
ccatatattgatagtcatctgcctgatctgaaggcattccttggtcccgaccctgcagta
cctggtcatgatctgatttatcgtaacatggacacagagaccggtgcagtatactccatt
cctgcacgtcgtatgaatgttgctcagattggaacattcattcgtaaagactggcttgat
aagctaggcctacctctacctactactactgaggaattctatgaagctttagttgcattt
aaagagcaagatcccggtggtgttggtaaagacaaggttgttccctttactatgaccagt
gatattcgctggagagcagcaacattaattgaatcctttatagatcctaacttaagcgat
aaggatcgttggattaatactgttgtagatcgttattatctgcttcccggttataaggaa
ggcgttcgtttcttaaataagatgtataatgaaggcttaattgataaccaatttgcactt
tataaagacgatacagacagtgataacttgattaagatgggtgttgccggtgcctttatt
cataactgggatcaaccataccgtgaaactccaggattattaaaagatctgcaagaaaat
gttcctgaggctgaaattgtttcaatcgatcctttccagaacgcgaatggtgtaaccgaa
aaatctctttatgacgttgccggtgttaacttctttgttcctgcttccagtaagaatgta
gaagctgcacttcgctacatcaactggttatccaagtttgagaaccgttacttcttacag
attggtgaagaaggagttactcatgagatggtagatggaattcctaagattatagctgct
gagggtgagaaaatcatgaactctcaacaaaacattgactataccatcatgattaacggt
cttgacgttggtgatgaagaaaagaatgcaaaagcacttgctttctcatatcctgttgaa
cctgatctgattgttaaggcgtatgaagatgctacacgtaatggacgttctgcaattgtt
attcctgtaatattaagcgctgcaggtccttatactcagaccttaattgataagggtaat
gagcttatggctaagtctgttactgctgctcctgaagactttgataaagtttgggatgca
ggtatcgaagagtggcttgctagcggtgctcaagaaattatcgatgagcgtgcagcaaaa
tacgaagagtacgaggcatcattaaacaactaa
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