Herbinix luporum: SD1D_1214
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Entry
SD1D_1214 CDS
T04072
Name
(GenBank) hypothetical protein
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
hsd
Herbinix luporum
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsd03000
]
SD1D_1214
Transcription factors [BR:
hsd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SD1D_1214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
HTH_11
HTH_36
RPA_C
HTH_24
HTH_Crp_2
DUF413
Motif
Other DBs
NCBI-ProteinID:
CUH92760
UniProt:
A0A0K8J5L7
LinkDB
All DBs
Position
I:complement(1311243..1312649)
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AA seq
468 aa
AA seq
DB search
MLTYSFDNRGKDTLYEYLYKQIKNDIYSNKLRPNEKLPSKRALAKHLNISTITVENAYSQ
LVAEGYIYSIPKSGYYVSDISANILKSDNHIGDNLTDDKTEKNRSDNYFIDFVNNSTDPE
NFPFTIWTKLMRETMSEKRSDLMIKSPSIGVYQLRRAIADYLYQFRGIETKPEQILVGAG
TEYLYGLIIQLLGHNKKYAVEDPGYQKVSRIYGANKVDCVHIPLDDNGINVEALEESKAN
VLHITPSHHFPTGLVTPISRRYELLSWASKSKDRYIIEDDYDSEFRLLGKPIPALQSIDA
AEKVIYINTFSKSLTSTIRISYMVLPKSLMERYNKELSFYSCTVSNFEQYTLAKFIEQGY
LEKHINRMRNHYRNIRDDILENIKKALGKKKGKIMEEDAGLHFLLQISTDLTDKELISRA
AKNGINISCLSQYYYDQANAIKNTLIINYSGVNPDNIEEGIKRLFQCF
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgctaacttattcctttgataatagaggaaaggataccctatacgaatacttatataaa
cagataaaaaatgacatatattcaaataaattaagaccaaatgagaagctaccatcaaaa
agggccctggctaaacacttaaatatcagcactattacagttgagaatgcttatagccag
ttggtagcagaaggatatatctattcaattcccaaaagtggttactatgtcagcgatatt
tctgcaaatattttaaaatcagataatcatattggtgataatttgactgatgataaaact
gaaaaaaacagatcagataactattttatcgattttgttaataactctacagatccggag
aattttccttttactatctggactaaactgatgagggaaaccatgtcagaaaaaagaagt
gatcttatgattaagtccccgtctattggggtttatcagcttcgtcgtgccatagcagat
tatttatatcaatttaggggaattgaaaccaagccggagcaaatccttgtaggagcagga
acagagtacctatatggacttataattcaattactgggtcataataaaaagtatgcggtt
gaagatccgggatatcaaaaagtatcccgtatttatggtgcaaataaggtagactgtgtc
catattcctttagatgataatggtatcaatgtggaggcattagaagagtctaaggcaaat
gttttacatataactccatcccatcattttcctacgggtcttgttactcctattagcaga
agatatgaattgttatcctgggcttcaaagtctaaagaccgctatataattgaagatgat
tatgacagtgaatttagattattaggtaaacccatacctgcattacaaagtattgatgca
gctgaaaaggtaatctatataaatacattttctaagagtttgacatctaccatacgtatc
agctatatggtgttgccaaaatccttgatggaacgatataataaagagcttagtttctac
tcctgtacagtatcaaattttgagcagtataccttggcaaaatttatagaacagggatat
ttggaaaagcatatcaacagaatgcgtaaccattatagaaatatcagagatgatatttta
gaaaatataaagaaagccctaggtaaaaaaaagggcaagatcatggaggaagatgcaggc
ttgcattttcttttacaaataagtactgatttgacagataaggaattaatatcccgagct
gccaagaatggtataaacatatcatgtttaagccagtactattatgaccaagcaaatgcc
ataaaaaacactttaattattaactattcaggggtaaatcctgataatattgaggaaggt
ataaagcggttgttccagtgtttctaa
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