Herbaspirillum seropedicae SmR1: Hsero_1090
Help
Entry
Hsero_1090 CDS
T01268
Name
(GenBank) GntR family transcription regulator protein
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
hse
Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hse03000
]
Hsero_1090
Transcription factors [BR:
hse03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Hsero_1090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
ABC_sub_bind
HTH_AraC
HTH_24
HTH_23
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
ADJ62607
UniProt:
D8J1I6
LinkDB
All DBs
Position
complement(1235310..1236368)
Genome browser
AA seq
352 aa
AA seq
DB search
MTQRAASKSKPKSPPAVRGSRATGRVTIIDVAAEAGVSPMTVSRALKTPALVQEQSRQRI
LEAIDKLGYVPNQAAATLASARSQVVAVLVPSLTNAVFIETLSGIRDYLASVGYQFLIGE
TGYDRHKEEELIATYLAHAPAGFLLSSSQQHDILQSRPASRAIPAVRMFDLGRSQQDYSV
GFSQTRAGHAVARHLAERGYRRPAFLAAQLDPRMMKRREGFRKGLQEAGLAADIEVLLPQ
PTTVDMGAQLLRRVLQDHPDCDSVFCCNDDLALGALFECQRQGISVPRQMAIAGFNDLSW
AACATPSITTVVTPRYDIGYQSAEMLVRQLKGEEIAKGRLDLGFELAVREST
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcgcgcagcatccaagtccaagcccaaatcccctcccgccgtacgtggcagc
cgcgccaccggacgcgtgaccatcatcgatgtggccgccgaggctggggtgagtccgatg
acggtctcgcgcgccttgaagaccccggcgctggtgcaggaacagtcgcgccagcgcatc
ctggaggccatcgacaagctcggctatgtacccaaccaggccgccgccacgctggcctcg
gcgcgctcgcaggtggtggccgtgctggtgccgtcgctgaccaatgcggtgttcatcgag
accctctcgggcatccgcgactacctggccagcgtgggctaccaattcctcatcggcgag
accggctatgaccgccacaaggaagaagaactcatcgccacctacctggcccatgcgccg
gcgggcttcctgctctccagcagccaacagcacgacatcctgcaaagccgcccggccagc
cgcgccatcccggcggtgcgcatgttcgacctgggccgcagccagcaggattactcggtc
ggtttttcgcagacccgcgccggccatgccgtggcccggcatctggccgagcgcggctac
cgccgccctgccttcctggcggcccagctcgatccgcgcatgatgaagcgccgcgaaggc
ttccgcaaaggcttgcaggaagctggcctggcagccgatatcgaagtgttgctgccgcag
cccaccaccgtggacatgggcgcgcagctgctgcgccgggtgctgcaagatcatcccgac
tgcgattccgtcttctgttgcaacgatgacctggccctgggcgcgctgttcgaatgccag
cgccagggcatcagcgtaccgcgtcagatggccattgccggcttcaatgacctctcctgg
gcggcctgcgccacgccctccatcaccaccgtggtcacgccgcgctatgacatcggctac
cagtcggccgagatgctggtgcgccagctcaagggggaagagatcgccaagggacggctg
gatctgggtttcgagctggccgtgcgcgagagcacctaa
DBGET
integrated database retrieval system
