Herbaspirillum seropedicae SmR1: Hsero_2882
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Entry
Hsero_2882 CDS
T01268
Name
(GenBank) hemolysin-type calcium binding protein
Organism
hse
Herbaspirillum seropedicae SmR1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
HCBP_related
RTX_C
Peptidase_C39_2
Motif
Other DBs
NCBI-ProteinID:
ADJ64374
UniProt:
D8IZN4
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Position
complement(3276165..3279584)
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AA seq
1139 aa
AA seq
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MAITITINRMSTLASAKAYVPGGSGAAQHDAAERREGLVRAGPLALWLQGNRWHAVAAAQ
GITPTAAFLPWQGWSAARWRTFQPIISCCPVRRPVVQARHELAVNKPHQQSLPVALASPA
APMSVAAAASGQSASVAATPSAKSAQESAPTIKRLRAEDAMVVTSAPACPATQDCLLPIA
APLRSAVQPADPGGSGKAAANPPSICPVVNVTPSPCDQTETVWVLPGTSECVPLSEAFPP
GVQISVSDCVPVPLSTLIKRLFPDLIIKPSPSASSPTPAATPAPAPSPVVSTAPVATPTV
APAGGATVTPVIAPASKPVIAPISAPVSAPASAPTVTPSATPAPTPAPASTPSVAPSVAP
ATTPPVASPVTPAAAPAPAAVVPAAATPVPATAAVAVKPLAALISIPEAVPVASLAPPPI
PQRPAGSKDNSGKDTLVGTTGDDTLWGGAGNDTLFGREGNDRLFGEDGDDQLLGGEGFDL
LDGGAGDDQLFGGLGNDQMWGGDGDDTMMGSDVSNTGRPLPAGQTDDDIMFGGAGKDGMF
GGAGNDQMWGGDGDDGLYGNEGDDKLYGEAGNDHIYGGKGNDVIQGGDGDDLIYGDDMEY
FWMQPDTTGGDDLLYGGAGNDSLFGGSGNDVLDGGSGNDSLVGGLGDDTYVVDGAGDTIR
EDADQGHDTVVASCSYTLGRNLEDLRLAEGGQFNGTGNAQDNLITGNSQDNILDGGRGAD
TLMGGTGNDSYFVDDVNDKVVEQAGEGVDTVFSRISTTLGANLENLTLLDSATPQHEIVN
GRDMLVYGYPHYAELDYSQGDAVAGYTGTCGETSVVNLCLMAGLAVTEAQAVKRAIANGW
CVTSGESQLGGSNQYDQVALLASYGIRAKAGYGYDEKALVKVLKEGRGALVSVNAGKLWD
NPGAVQLGNGNHVITVTGVVCDPGTGEAQGFFIADSGRGRPEDACRYLSKDELRKVADVT
DGYMVATVDPIKVPNENLDATGNELDNVITGNRGANVIRGGRGNDTLIGGAGNDTYVFAR
GDGQDVIADQDATRGNIDTLQLSDLRQTNLWFSQSGNDLRIDVLGGNDRITIKDWYQGGS
SGSDNHIERIRTADGNTLYDSDVDKLVQAMASFAPPPALQSEWTPGQTSQGKVLLTVTH
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggctatcaccatcaccatcaatcgtatgagtacgctggcttcagccaaagcctacgtg
cctggcggttcgggcgctgcacagcacgacgcagcggaaaggagggaagggctggtccgt
gccggccccttggccctgtggctccagggcaaccggtggcacgccgtggcggctgcgcag
ggtatcacgccaacggcggcctttctaccctggcagggctggagcgctgcgcgctggcgt
acgttccagcccatcatctcgtgttgcccggtgcgtagacccgtagtgcaggcgcgtcat
gagttggcggtgaacaagccgcaccaacagagcctgccagtggcgctcgccagtcctgcg
gcgccgatgagcgtggcggcagcagccagcggccagagcgccagcgtagcggcaacacca
tcggccaagtctgcgcaagagagcgcacccacgatcaagcgtttgcgtgcggaggacgcc
atggtcgtgacatctgctcccgcctgtcctgccacgcaggattgcctgctgcccattgca
gcaccgctgcgcagtgcagtccagccagccgatcccggcggctccggcaaggccgctgcc
aatccgcccagcatctgccctgtggtgaacgtgacgccatcgccgtgcgaccagaccgag
acggtctgggtccttcccggcacgtccgaatgcgttcccttgtcggaggcgtttccaccg
ggcgtgcagatttccgtcagcgattgcgtcccggtgccgctgtcgaccctgatcaagcgg
ctcttcccggacctgatcatcaagccttccccgtccgcctcgtcgcccacgcctgcagcc
acacctgcgcccgcaccctcacccgtagtgagcacggcgcctgtggctacgccgacggta
gccccggcaggaggcgctacggtcaccccggtgatcgcgccggcaagtaagccggtaatt
gcgccaataagtgcgccagtaagtgcgccagcaagtgcgccgacagttacaccatcggcc
acccccgcgcccacccccgcgcctgcctccactccatccgtcgcgccatcggtagcgccg
gcgaccacgccgccagtggcgagcccggtcacgccggccgccgcccctgcgccggcggcg
gtcgttcctgcggctgccacgccggtacccgcaaccgctgcggtagcggtcaagccgctg
gcggcgctgatctccattcccgaggctgttcccgtggcctcgctggcgccgccgccaata
cctcagcgccccgcaggcagcaaggacaatagcggaaaggacacgctggtagggaccacg
ggcgatgacaccctatggggcggcgcgggcaacgacaccctgttcggccgcgagggcaat
gatcgtctcttcggcgaagacggcgacgatcagctcctgggcggcgagggctttgatctg
ctcgacggcggcgccggtgacgaccagctcttcggtggcctgggcaacgaccagatgtgg
ggcggcgatggcgacgacacgatgatgggcagcgacgtcagcaacaccggcaggccgctg
ccggccgggcagaccgatgacgacatcatgtttggcggcgccggcaaggatggcatgttc
ggcggcgccggcaatgaccagatgtggggcggcgacggtgacgatggtctctacggcaat
gaaggcgacgacaagctctacggtgaagccggcaatgatcacatctacggcggcaaaggc
aatgacgtcatccagggcggtgatggtgatgacctcatctacggcgacgacatggagtat
ttctggatgcagcccgacaccaccggtggcgatgacctgctctatggcggcgccggcaac
gacagcctcttcggtggctcaggcaatgacgtacttgatggcggcagcggcaatgatagc
ctggtcggcgggctgggggatgacacctatgtcgtcgatggcgccggcgacaccatcagg
gaagacgccgaccaagggcatgacactgtcgtcgcctcttgctcctacacgctgggccgt
aacctggaagacctgcggctggccgagggcggccagttcaatggcaccggcaacgcgcag
gacaacctgatcaccggcaacagccaggacaacatcctcgacggtggccggggcgcggac
accctgatgggcgggaccggcaacgacagctatttcgtcgatgacgtcaacgacaaggtc
gtggagcaggccggggaaggcgtcgataccgtcttctcccgcatcagcaccaccctgggc
gccaacctggaaaacctgaccctgctcgatagcgccacgccgcagcacgagatcgtcaat
ggccgggacatgctggtctatggctatccgcattatgccgagctggattattcgcagggc
gacgccgtggccggctataccggcacctgcggcgagaccagcgtggtcaacctgtgcctc
atggccgggctggctgtcaccgaggcccaggcggtcaagcgcgccatcgccaatggctgg
tgcgtcaccagtggcgagagccagctcggcggcagcaatcagtatgaccaggtcgcgctg
ctggccagctacggtatccgcgccaaggccggctatggctacgacgagaaagccctggtc
aaggtgctcaaggagggccggggtgcgctagtgtcggtcaatgcgggcaagctctgggac
aaccccggcgcggtgcagctgggcaatggcaaccacgtcatcacggtcaccggtgtggtc
tgcgaccccggcaccggcgaggcacagggcttcttcatcgccgattcgggccgtggacgt
ccggaggacgcctgccgctacctgagcaaggacgaactgcgcaaggtggccgacgtcacc
gatggctacatggtcgccaccgtcgatcccatcaaggtccccaacgaaaacctcgacgcc
accggcaacgagctggacaacgtcatcaccggcaaccgcggcgccaacgtgatccggggc
gggcgcggcaatgacacgctgatcggcggggccggcaacgacacctatgtgttcgcccgc
ggtgatggccaggacgtcatcgccgaccaggacgccacgcgcggcaatatcgatacgctg
caactgagcgacctgcgccagaccaatctgtggttcagccagtctggcaatgatctgcgc
atcgacgtgctgggcggtaacgaccgcatcaccatcaaggactggtaccaaggtgggagc
agcggcagcgacaaccatatcgaacgcatccgcaccgcagacggcaataccctctacgac
agcgacgtggacaagctggtgcaggccatggccagcttcgccccgccgccggccttgcag
agcgagtggacgccggggcagaccagccagggcaaggtcttgctgaccgtcacccactga
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