KEGG   Halanaeroarchaeum sulfurireducens M27-SA2: HLASA_1491
Entry
HLASA_1491        CDS       T04261                                 
Symbol
lig
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hsf  Halanaeroarchaeum sulfurireducens M27-SA2
Pathway
hsf03030  DNA replication
hsf03410  Base excision repair
hsf03420  Nucleotide excision repair
hsf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hsf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HLASA_1491 (lig)
   03410 Base excision repair
    HLASA_1491 (lig)
   03420 Nucleotide excision repair
    HLASA_1491 (lig)
   03430 Mismatch repair
    HLASA_1491 (lig)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hsf03032]
    HLASA_1491 (lig)
   03400 DNA repair and recombination proteins [BR:hsf03400]
    HLASA_1491 (lig)
Enzymes [BR:hsf01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     HLASA_1491 (lig)
    6.5.1.6  DNA ligase (ATP or NAD+)
     HLASA_1491 (lig)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     HLASA_1491 (lig)
DNA replication proteins [BR:hsf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    HLASA_1491 (lig)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     HLASA_1491 (lig)
DNA repair and recombination proteins [BR:hsf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HLASA_1491 (lig)
   NER (nucleotide excision repair)
    Other NER factors
     HLASA_1491 (lig)
   MMR (mismatch excision repair)
    Other MMR factors
     HLASA_1491 (lig)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: ALG82377
UniProt: A0A0N9NBJ3
LinkDB
Position
complement(1456745..1458385)
AA seq 546 aa
MEFSEFADRAAAVEAASADTEITHLVADLFEAADDDLSIVARYVQGRVLPGHDETTLNVG
PNNCYAAIARAAGQNVDADDVEATVADLGDVGDVAAAYDFGTQRGLSAFGTGDEESLTVG
GVHAELETLANASGPGSTDEKVTILFGLFNRCSSTEARYLARLVLSEMRIGVGAGTVRDA
IIEAFDVSAEAVERALQVSNDYGLVAETARDDPDRLDEISLEIGRPVQAMLAQAGTAGDA
LSAWGETVVETKYDGARVQIHVDDGVDIYSRNMEDVTDPLPDVVETVEEAIDVPAILDGE
VLAIDESGDPLPFQELLRRFRRKHDIEQASAAVDLDLVVFDCLHADGDDLIDEPLCDRRD
RLERIWDGHLADFSLAAEPETIARLEDEALDAGHEGIMLKDADSAYTPGRRGKNWLKRKP
DVETLDLVVTGAEWGEGRRASFLGSYELSVHTPNGFETVGKVATGITDEELKRLSALVEP
KIRSEDGRTVDVEPSVVFEVGYEEIQHSPTYSSGYALRFPRFIGVREDLNAEDAGTLDRV
ERLVDA
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggagttcagcgaattcgccgaccgagcggccgccgtcgaggccgcctctgccgacacc
gagatcacccatctggtggccgacctgttcgaggcggccgacgacgacctctccatcgtc
gccaggtacgttcagggtcgcgtgttaccgggacacgacgagacgaccctgaacgtcggc
ccgaacaactgctatgcggcgatcgcacgcgccgccggccagaacgtcgacgccgacgac
gtggaggcgacagtcgccgacctgggagacgtcggcgacgtcgccgctgcgtacgacttc
ggtacccagcgagggctctccgcgttcgggacaggcgacgaggagtcgttgacggtcggc
ggagtccacgccgaactcgagacgctcgccaacgcgagcgggccggggagcaccgacgag
aaggtgaccatcctcttcggtctgttcaaccggtgttcgtcgaccgaggcgcgctatctt
gcccggctcgtcctctccgagatgcgtatcggggtcggggcgggcaccgtccgggacgcc
atcatcgaagcgttcgacgtctcggccgaggccgtcgagcgcgccctccaggtctcgaac
gattacggtctggtggccgagacggcccgagacgacccggatcgcctcgacgagatatcc
ctggagatcggacgccccgtccaggcgatgctcgcgcaggcgggcaccgcgggggacgcg
ctctcggcgtggggcgagacggtcgtcgagacgaaatacgacggggcacgggtccagatc
cacgtcgacgacggggtcgatatctactcccgaaacatggaggacgtgacagacccgctc
cccgacgtcgtcgagacggtcgaggaggccatcgacgtgcccgcgatcctcgacggcgag
gtgctggcgatcgacgagtcgggcgatcccctccccttccaggagctcttgcgccgcttc
cggcggaaacacgacatcgagcaggccagtgcggcggtcgacctcgatctggtggtgttc
gactgtctccacgccgatggcgacgacctcatcgacgagccgctgtgcgaccgacgcgac
cgcctggaacggatctgggacggccacctcgccgacttctcgctcgccgctgagccggag
acgatcgcgcgcctggaggacgaggcgctcgacgcgggccacgaagggatcatgctgaag
gacgcggactccgcgtacaccccgggccggcgcgggaaaaactggctcaagcgcaaaccg
gacgtcgagaccctcgatctcgtcgtgacgggcgccgagtggggtgaaggacggcgggcc
agtttcctgggatcgtacgagctctccgttcacacgccgaacgggtttgagaccgtcggc
aaggttgccacgggcatcaccgacgaggaactgaagcgactctccgccctcgtcgaaccg
aagattcgatctgaggacggacggaccgtcgacgtcgaaccgtcggtcgtcttcgaggtg
ggatacgaggagatccagcactcgcccacctattcgtcggggtacgcactcaggttcccg
cggtttatcggcgtgcgcgaggacctgaacgccgaggacgccggcacgctcgaccgcgtc
gaacgcctcgtcgacgcctga

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