Hymenobacter sediminicola: H4317_14470
Help
Entry
H4317_14470 CDS
T09117
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hsk
Hymenobacter sediminicola
Pathway
hsk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
H4317_14470 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsk03400
]
H4317_14470 (xseA)
Enzymes [BR:
hsk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
H4317_14470 (xseA)
DNA repair and recombination proteins [BR:
hsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
H4317_14470 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
DUF1825
Motif
Other DBs
NCBI-ProteinID:
QNH61356
UniProt:
A0A7G7W4R3
LinkDB
All DBs
Position
3387535..3388899
Genome browser
AA seq
454 aa
AA seq
DB search
MPPLYNRRSEPGLPASALPPVALPLAELLLRVKQTLTERFADSYWVVAEIADLTLPRFDG
SHCYLTLTDQHQTGRGAQLKAQARATIWSQRYQQVAPAFEEHTGQELRVGLKIMLRVQVK
FHEQYGLSLDVLAIDPTYTVGELARQRLETLRKLQEKGLLDRQRALPLALAPQRLAIISS
PTAAGFQDFVRQLEESPYAFSLALFPASMQGTEAPASIRAALDTIRPRRRYFDAVVLIRG
GGSKIDLLAFDDYGLAAAIGAFPVPVLTGIGHERDEAVVDLAAHLALKTPTAVAAFLAER
LARLDAVFDGYAGRIREVAQEVVQASASHFDRLGRRTHLAAQNRLQEHYTALRQRVRAAA
PLARLRLRQQEQQLGQHRQALQRAAHHAAEGQHRQLRRLGHTLARRFRYLHRRRREQLLT
HRFQLQLATERLLHRAEIRLLTLRMPPAAQPAAD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccctctacaatcgtcgttctgaaccaggtttgccggcttcggcgctgccccct
gtggctctgccgctggcggagttgctgctgcgagtgaagcagacgctcacggaacgattt
gccgactcctactgggtggtggccgaaattgccgacctcacgttgccgcgcttcgacggc
tcccactgctacctcaccctcaccgaccagcaccagaccggccgcggcgctcagctgaag
gcccaggctcgcgccaccatctggagccagcgctaccagcaggtggccccggcgtttgaa
gagcacacggggcaggagcttcgggtcggcctgaaaatcatgctgcgcgtgcaggtgaag
tttcacgagcagtacggcctgagccttgatgtgctggccattgacccgacctacacagta
ggcgaactggcccgccagcgcctcgaaacgttgcgcaagctgcaggagaaagggttacta
gaccgtcagcgggcactgccgttggcactggcaccccagcggctggccatcatttcctcg
cccacagccgccggctttcaggattttgtgcgccagctggaagagtcgccgtatgcgttt
tctctggcgctgtttccggccagcatgcagggcacagaggcgccggccagcatcagggcc
gcactggacactattcggccccggcgccggtatttcgatgcggtggtcctgattcggggt
ggcggctccaaaatcgacctgctggccttcgacgactacggcctcgccgccgccatcggg
gcctttccggtgccggtgcttacaggtatcgggcacgagcgggacgaagccgtagtggac
ttagcggcccatctggccctgaaaacgccgactgctgttgcagcgtttctggctgagcgg
ctggcccggctggatgccgtatttgatggctacgcgggccgtattcgggaggtggcccag
gaagtagtgcaagcatccgcaagccacttcgaccggctggggcgccgtacccatctggcg
gctcaaaaccgcctgcaggaacattatactgcgctgcgccaacgggtgcgggcagcggct
ccgttggcccgccttcggttgcggcagcaggagcagcagcttggccagcaccggcaggca
ctgcaacgggccgcccaccacgctgctgaaggccagcaccggcagttgcggcggctgggc
catacactggcccgccgcttccgctatctgcataggcggcggcgcgagcagctgctcacc
caccggtttcagctgcagctggctaccgaacggttgctgcaccgtgctgaaatccggctg
ctcacgctgcgcatgccgccagcggcgcaacctgcagccgattga
DBGET
integrated database retrieval system
