KEGG   Halapricum salinum: DV733_04610
Entry
DV733_04610       CDS       T05943                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hsn  Halapricum salinum
Pathway
hsn03030  DNA replication
hsn03410  Base excision repair
hsn03420  Nucleotide excision repair
hsn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hsn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DV733_04610
   03410 Base excision repair
    DV733_04610
   03420 Nucleotide excision repair
    DV733_04610
   03430 Mismatch repair
    DV733_04610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hsn03032]
    DV733_04610
   03400 DNA repair and recombination proteins [BR:hsn03400]
    DV733_04610
Enzymes [BR:hsn01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     DV733_04610
    6.5.1.6  DNA ligase (ATP or NAD+)
     DV733_04610
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     DV733_04610
DNA replication proteins [BR:hsn03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    DV733_04610
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     DV733_04610
DNA repair and recombination proteins [BR:hsn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DV733_04610
   NER (nucleotide excision repair)
    Other NER factors
     DV733_04610
   MMR (mismatch excision repair)
    Other MMR factors
     DV733_04610
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: QCC50568
UniProt: A0A4D6HBM1
LinkDB
Position
complement(930919..932568)
AA seq 549 aa
MEFSVFADRASEIEAASADTEITAQVRAILADTGEDLPTIVRFLQGRVFPAHDSTTLDIG
PALCYEAIARAAGQNVTSDDIERRLADRGEIGAVAASYDFGGQRGLGAFTGGDSDELTVA
DADADLRELAATEGSGSQDTKGDLLFGLFNRASPDEAKYLARLVLGEMRIGVGEGTVRDA
IAAAFDVSVEAVERALQVTNDYGLVAEVARENGESGLADLYLEIGRPVQAMLAQAGTVTG
ALEDWEQAAVEVKYDGARVQVHYDGEQVWLFSRNMEDVTDPLPEVVEFVESNLDVPAILD
GEVVAVDDAGDPLPFQEVLKRFRRKHDVAKAREDVTVRLQAFDCLHVAGEDLLDAPLVDR
RERLETLLESGVSDWWLADDAEAVADIEADALEAGHEGIMLKDPDSTYSPGRRGKHWRKR
KPDVETLDLVVTGAEWGEGRRAELLGTFEVSARTDTGYATVGNVATGITDAQLETLTDRL
EPQIRSEDGTAVDLDPTVVFEVGYEELQTSSTYESGYALRFPRFLGVREDKDPDGADSLE
RVERLAETQ
NT seq 1650 nt   +upstreamnt  +downstreamnt
atggagttctccgtcttcgccgaccgagccagcgaaatcgaggccgcgagtgccgacacg
gagatcaccgcgcaggtccgggcgatactggccgacaccggcgaggacttgccgacgatc
gtccgcttcctgcagggtcgggtgtttccggcccacgactcgacgacgctggatatcggg
ccggcgctgtgctacgaggcgatcgcccgagcagccggccagaacgtgaccagcgacgat
atcgaacggcggctggccgatcgcggcgagatcggtgcggtcgcggcgagctacgacttc
ggcggccagcgcggcctcggtgcgttcaccggcggggacagcgacgagctgaccgtcgcc
gatgccgacgccgacctgcgcgaactggctgcgaccgaagggtcgggcagtcaggacacg
aagggggacctcctctttggactgttcaaccgggccagccccgacgaggcgaagtacctc
gcacgactcgtcctcggagagatgcggatcggcgtcggcgagggcacagtcagagacgct
atcgcagcggctttcgacgtgtccgtcgaggccgtcgagcgagccctgcaggtgaccaac
gactacgggctggtagccgaggtcgcccgcgagaacggcgagtcggggctggccgacctc
tacctcgagatcggccggcccgttcaggcgatgctcgcccaggccgggaccgtcaccggg
gcgctcgaagattgggaacaggcggcagtcgaagtcaagtacgacggcgcacgcgttcag
gtccactacgacggcgagcaggtgtggctgttctcccgcaacatggaggacgtgaccgac
ccgctgccggaggtcgtcgagttcgtcgagtcgaacctcgatgttccggcgatcctcgac
ggggaggtcgtcgccgtcgacgacgcgggcgatccccttcccttccaggaagtcctgaaa
cgcttccgccggaaacacgacgtcgcgaaggcacgcgaggacgtgactgttcgtctgcag
gcgttcgactgcctgcatgtggctggcgaggatctgctcgacgccccgctcgtcgaccgt
cgagagcgactcgaaaccctgctggagtcgggcgtctcggattggtggctcgcggacgac
gccgaggcggtcgccgacatcgaggccgacgctctggaggcgggccacgaggggatcatg
ctcaaagatcccgactcgacctattccccgggccgccggggcaaacactggcgcaagcgc
aaaccggacgtcgagacgctcgacctcgtcgtcactggcgcggagtggggcgagggccgc
cgcgccgagttactcgggacgttcgaggtttcggctcggaccgacacaggatacgcgaca
gtcggcaacgtcgcgacgggaatcaccgacgcacagttggagacgctgactgaccggctc
gaaccgcagattcgtagcgaggacggcactgcggtcgatctcgatccgaccgtggtcttc
gaggtcggctacgaggaactgcagacgtccagcacctacgagtcgggctacgcgctccgc
ttcccgcgatttctgggcgtccgcgaggacaaagaccctgacggcgcagacagtctcgaa
cgggtcgaacgattggccgagacgcagtag

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