Histophilus somni 129PT: HS_1486
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Entry
HS_1486 CDS
T00386
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
hso
Histophilus somni 129PT
Pathway
hso03030
DNA replication
hso03430
Mismatch repair
hso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HS_1486 (holB)
03430 Mismatch repair
HS_1486 (holB)
03440 Homologous recombination
HS_1486 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hso03032
]
HS_1486 (holB)
03400 DNA repair and recombination proteins [BR:
hso03400
]
HS_1486 (holB)
Enzymes [BR:
hso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HS_1486 (holB)
DNA replication proteins [BR:
hso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HS_1486 (holB)
DNA repair and recombination proteins [BR:
hso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HS_1486 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
DUF4600
Motif
Other DBs
NCBI-ProteinID:
ABI25759
UniProt:
Q0I5J1
LinkDB
All DBs
Position
complement(1677664..1678722)
Genome browser
AA seq
352 aa
AA seq
DB search
MQISLLSLCSKIFVKLCKNLLKKMCNLYPWLQPYYQQIIQPFLQEKGHHALLFKAEQGIG
IEQLIENIAGWLMCRQKDALQSCRQCQSCALFRAGNHPDFYRLESLDNKDIGVEQVREMN
EKVSQFAKQGGNKVVFIRQAERLTESAANALLKTLEEPRPHTYFLLQMDFSAGLLATIYS
RCQAWVINTPTEQQGLVWLQQQRQEKIADLQTALRINYNRPLLALDCLEKGLLEQRTTFL
RQFWLFYIRRSPLELLPHFTKENVLLQLDWMSAFLHDALKEKLGVRQGWISQDLARGILQ
FNEKQNVEELLKAIQIIQKMRLNLTQINGVNQELILLEGLTRLVTDVFERKE
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcagcctattgagcttgtgcagcaagatattcgtaaagctgtgcaaaaattta
ttgaagaaaatgtgtaatttatatccttggttacaaccttattatcaacaaattatccaa
ccttttttacaagagaaagggcatcatgctttgttatttaaagccgaacaaggaataggt
attgagcaattgattgaaaatatcgcaggttggttaatgtgccggcaaaaagatgcccta
caatcttgccgacaatgccaaagttgtgcattattcagagcaggaaatcatcctgatttt
tatcgacttgaatctcttgacaataaggatattggtgtcgagcaagtgcgagaaatgaat
gaaaaagttagtcagtttgcaaaacaaggcggaaataaagttgtgtttattcgtcaagct
gaacgtttaactgaaagtgcggcgaatgcgttactaaaaacgttggaagagcctagaccg
catacttattttttattacaaatggacttttcggctgggttgttagcgacaatttatagt
cgttgtcaagcttgggttattaatacgccaacagagcaacaaggtcttgtatggttgcaa
cagcagcgtcaggaaaaaatcgcagatttacaaaccgcacttcgtattaattataatcgt
ccattgcttgcattggattgtttggaaaaggggttattagaacaacgaacgacattttta
cgtcagttttggttgttttatattcgacgttctcccttggagttattaccgcactttacg
aaagaaaatgttttattacaactggactggatgagtgcatttttacatgatgcactcaaa
gaaaaattaggtgttcggcaaggttggatcagccaagatttagctcgtggcattttgcaa
tttaatgaaaagcaaaatgtggaagagttgttaaaagcaattcaaattatccaaaaaatg
cgtttgaatctaacgcaaatcaatggggttaaccaagagttaattttattagagggattg
actcgtttggtaaccgatgtatttgaaaggaaagaatag
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