Hippoglossus stenolepis (Pacific halibut): 118097979
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Entry
118097979 CDS
T08308
Symbol
scarb1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118097979 (scarb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118097979 (scarb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118097979 (scarb1)
Membrane trafficking [BR:
hsp04131
]
Endocytosis
Phagocytosis
Scavenger receptors
118097979 (scarb1)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118097979 (scarb1)
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Gene cluster
GFIT
Motif
Pfam:
CD36
PorA
Motif
Other DBs
NCBI-GeneID:
118097979
NCBI-ProteinID:
XP_034997211
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Position
18:19198031..19223129
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AA seq
506 aa
AA seq
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MPLNRSQLAVGFAVAGVLAVVFGIVLTFVGPLVIDDQIVKNTVIDPKNDLSYTMWKDIPV
PFFMSVYFFNILNPKEMLKGEKPMVEQRGPYVYRKRCQKDNITFHPNGTVSYKEYRTYFF
EPSMSVGNESDIVTIPNMLVLGAAVMMENLPYAVRLMISATFKTFKEGPFMTKTVGELMW
GYDSGLVDFLNKYLPGMLPSTGKFGLFAEFNNSNTGLFTIFTGQDDIRNVHKVDSWNGLT
ELNYWQTPQSNMINGTAGQMWPPFMTKESTLPFYSPDACRSMELVYQRPGVMKGIPLYRY
VAPKTLFANGTDYAPNEGFCPCRQSGLLNVSSCRHKSPVFISHPHFFNADPVLLDYVDGL
HPNEEEHGLFIDIHPQTGVPLNVSIRLQLNLYMKKVSGITETGKISEVVMPMIWFEESGY
IDGPILNTFHTNLVILPAVMEYMQYGFIALGLATIIIAALVHHKKRRSDRNATMISTVLE
NPGASDKKPVKGSHGHETLEKYNINN
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaataggtcccagctggctgtggggttcgcggtggccggtgtcctggccgtg
gtgtttgggatagtcctcacttttgtgggtccgctggtaatcgacgaccagatcgtgaag
aacacagtgatcgacccaaagaatgatctgtcctacaccatgtggaaggacatccctgtg
ccgttcttcatgtcggtctacttcttcaacatcctcaaccccaaggagatgctgaaagga
gaaaagcccatggtggagcagcgaggaccttatgtgtacagaaaacgctgtcagaaagac
aacatcacatttcatccaaatggcacagtgtcgtataaggaatacagaacatacttcttc
gagccttccatgtctgtagggaacgagtccgacatcgtaacgataccaaatatgttggtg
ctgggtgcagcggtgatgatggaaaatctaccgtacgcagttcgtttaatgatcagcgcc
accttcaagactttcaaggaaggaccctttatgaccaagaccgtcggggagctgatgtgg
ggctatgacagtggactggtcgatttccttaataaatatctacccggcatgctgccctca
actggaaagtttggcctttttgccgaattcaacaactccaacactggtctgttcaccatc
ttcaccggacaggacgacatcaggaatgttcataaagttgattcctggaatggcctgaca
gagctgaactactggcagaccccgcagtctaacatgatcaatggaacagctgggcagatg
tggcctcccttcatgacaaaagaaagcactttgccattctacagccctgacgcctgcagg
tctatggagcttgtttaccagcgtcctggtgtgatgaagggaatccctctttatcggtat
gttgcacccaagaccctgtttgccaatgggacagactacgcccccaacgaaggtttctgc
ccctgtagacagtccggcctgctgaacgtcagcagctgtcgccacaaatctccggtcttc
atctctcatcctcacttctttaatgctgatcctgtgctcctggactatgtggacggcctc
catcccaatgaggaggagcatggcctcttcatcgacattcacccacaaaccggtgtccct
ctcaatgtgtccatccgcctgcagctcaacctctacatgaagaaagtgtcaggaattaca
gaaactggcaagatttctgaggtggtgatgcccatgatctggtttgaggagagtggatat
atagacgggcctatcctcaacacgttccacacaaacctggtcattcttcctgctgtgatg
gagtacatgcagtacggcttcatagcgctcggcctggcaacgataataatcgccgctctg
gtgcatcataagaagcggaggtctgatagaaatgctacaatgatctccacagttttggag
aaccccggggcctccgacaaaaagccagtaaaaggctcacatggccatgaaacactggag
aaatataacataaataactaa
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