Hippoglossus stenolepis (Pacific halibut): 118099912
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Entry
118099912 CDS
T08308
Symbol
rbm25b
Name
(RefSeq) RNA-binding protein 25b isoform X1
KO
K12822
RNA-binding protein 25
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118099912 (rbm25b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118099912 (rbm25b)
Spliceosome [BR:
hsp03041
]
Complex A
U1 snRNP components
U1 related factors
118099912 (rbm25b)
Complex B
118099912 (rbm25b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
118099912
NCBI-ProteinID:
XP_035000604
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All DBs
Position
20:complement(15011391..15022806)
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AA seq
823 aa
AA seq
DB search
MSFPPHLNRALLPPPGIPPQYAGFPSGGPMIPVHMGIMTPTSAVMVTSMPVVSKPPVPRK
DIAAMRAKEIDENSGPTTTVFVGNISEKASDMLIRQLLAKCGIVLSWKRVQGASGKLQAF
GFCEYKEPESTLRSLRLLHDLLIGERNLLVKVDAKTKAQLDEWKAKKKTSNGIKKAEDGG
DDDEEVLDEETKKKDQIVKGAIDGLMREYAAELNAPSQDEDSQRRKRKKEKKEEDDINTI
DMEEDKRDLISREISKFRDTHKKLEEEKDKREKERLEFERDRKDREKERERERERRDRER
EKEREREQHRERERERDRDKDRDKDRDRRPRERERERDWERDRSRERSVDHNRARPSLTD
RSLMIPEPSRDRDREKKRDQEDDEESYERRKLERKLRDKETAYQERLKNWELRERKKARD
YAKETEREDERRREMMKEGKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADER
DRKREKEELEEIRQRLLSEGHPDPDAELRRMEEEEEERLRQPPIVQEPEPEVERERHRSS
RDHRDRRGEQDRAEVRSRPTQSDDEVEEGEAQDYDNEEDNPDTKPCLKPKMRPITAAPSV
SSASGNASPNTPGDESPCGIIIPHENSPPEALPQEEHRPKIGLSLKLGATGSPSQPNAGK
RKKLPVDSVFDEEEADEQPRKRKLVPLDYDDDDKSLGVDGAGLSSIKGADNEEKRKNIKS
LIEKIPTAKPELFSYPLDWTMVDTTLMERRVRPWINKKIIEYIGEEEATLVDFVCSKVMT
HSMPQSILDDVAMVLDEEAEVFIVKMWRLLIYETEAKKIGLAK
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccccctcatttaaaccgggcgctgttgccacctcctgggattccaccccag
tatgctggcttcccctcaggaggtccaatgatcccagttcacatgggcatcatgaccccc
acctctgcagtgatggtgacttccatgccagttgtcagtaagcctccagttcctaggaag
gatattgctgctatgcgagccaaagaaattgatgagaacagtggtcccaccaccactgtg
tttgtggggaacatttcagagaaagcttcagacatgctgatcagacagctgcttgcgaaa
tgtggaattgttctgagctggaagagagttcaaggagcctctggcaagcttcaagcattt
gggttttgcgagtacaaggagccagagtctacgttgcgttccctgaggctgcttcatgac
ctgctgattggagaaagaaacctcttggtgaaggtggatgccaagacaaaagctcagcta
gacgagtggaaggccaagaagaaaacttcaaatgggattaaaaaggctgaagatggagga
gatgatgatgaagaggttctagacgaggagaccaagaagaaggatcaaatagttaaaggt
gccattgatggcttgatgcgggaatacgctgccgaactcaacgcaccttcacaggacgag
gactcccagcgacgaaagagaaaaaaagagaaaaaagaagaggatgacattaacacaatt
gatatggaggaggacaagagagacctgatttccagagagattagtaaattccgtgacact
cacaagaaactggaagaggagaaggacaagagggagaaggagcggctggagttcgagcgg
gataggaaggatcgggaaaaagagcgagagcgggaaagagagcggcgcgaccgcgagagg
gagaaggaacgggagagagagcagcatagggaaagggagcgagaacgggaccgagacaaa
gaccgagacaaagaccgcgaccgcaggcccagagagagagagcgggagagggactgggag
agagacagaagccgtgagaggagcgtcgaccacaacagagccagaccaagcttgactgac
cgttccctgatgattccggagccgagtcgagaccgagacagagaaaagaagcgagaccaa
gaggatgacgaggagtcgtatgagcgcaggaagctggagaggaaactccgagacaaagaa
acggcctatcaggagcgtctaaaaaactgggagctcagggagaggaagaaggctcgggat
tatgccaaggagaccgaaagggaagatgagcgtcgacgagagatgatgaaagaggggaaa
aggttgaaagagtttcttgaagactatgatgacgaccgagatgatccgaagtactacagg
ggcagtgcactgcagaagcgtctcagagaccgagagaaggagatggaggcggacgagcgt
gacaggaagagggagaaggaggagctggaggaaatcagacagaggctgttgagcgaggga
catccagacccagacgcagagctacgcaggatggaagaggaagaggaggagcgtctgaga
caacctcccatcgtccaagagccggagcccgaagtggaacgggagcgccacaggagttca
agagaccaccgggaccgccgcggggaacaggatagggcagaagtccgctcccggcccacc
caatcagatgacgaggtagaggagggtgaggcgcaagactatgacaacgaggaagataac
cctgacactaaaccgtgcctgaagcccaagatgcggcccatcacagcggcgccgtccgtg
tcatcggcaagtggcaacgcgtccccaaacacgcccggggacgagtcgccctgcggcatc
atcatcccccacgagaactcgccccctgaggcgctgccgcaggaggaacaccggccgaag
atcggcctcagcctcaaactaggtgccacaggaagccccagtcaacccaacgcaggtaaa
aggaagaagctgcccgtggacagcgtcttcgacgaggaggaggccgacgagcagccccgc
aagaggaaactggtgccgctggattacgacgacgacgacaagagcctcggggtggacggg
gccgggctctccagcatcaagggagccgacaacgaagagaaacgcaaaaacatcaagagc
ctgatagaaaagattcccacagcaaagcctgagctgttctcctacccactggactggact
atggttgatacgacgttaatggagcgacgtgttcggccctggatcaataaaaagatcatc
gagtacatcggagaggaggaggcaacgttagtggactttgtctgctcgaaggtgatgacg
cacagcatgccacagagtatcttggatgatgttgccatggttctcgatgaagaagctgaa
gtcttcatcgtgaagatgtggcggctacttatttacgaaactgaggccaagaagattgga
ctggcgaaataa
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