Hippoglossus stenolepis (Pacific halibut): 118101022
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Entry
118101022 CDS
T08308
Symbol
rbfox3a
Name
(RefSeq) RNA binding protein fox-1 homolog 3 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118101022 (rbfox3a)
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118101022 (rbfox3a)
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
118101022
NCBI-ProteinID:
XP_035002511
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All DBs
Position
21:complement(724511..1213157)
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AA seq
386 aa
AA seq
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METPSWAETKPGSGLCKPGTIALFGNVVYSGLLNEHFWHFGVPLVTRLGNQEAPAPPEAM
AQPFPPAQYPAPPQNGIPAEYTTPHTHPPADYTGPSTVAEHALTLYTATHSHSEQPGNES
NNPSLTSNTVTAEEAVQTEGSQQLHLQPNDSSMKQQPKRLHVSNIPFRFRDPDLRQMFGQ
FGKILDVEIIFNERGSKGFGFVTFETSADADRAREKLNGTIVEGRKIEVNNATARVMTNK
KVANPYTNGWKLNPVVGAVYGPEFYAVTGFPYPSTGAAMAYRGAHLRGRGRAVYNAFRAA
PPPPPIPAYGAVVYQDGFYGAEIYGGYAAYRYAQPTGTAAAAYSDSYGRVYATADPYHHT
IAPAATYSVGTMASLYRGGCSRFTPY
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggagacccccagttgggcagaaaccaagccaggaagtggtctgtgcaaaccaggaacc
attgctctgtttggcaacgtggtgtacagcggactgctcaacgagcacttctggcatttt
ggggttccccttgtcaccagactgggtaaccaagaggccccagctccccctgaagccatg
gctcaacctttcccaccagcccagtaccctgctccaccacagaatggcatccctgctgag
tacaccacaccccatacccatcctccggccgactacacaggaccaagcacggtggccgag
cacgcccttacactgtacacagcgacacactcacacagcgaacagccaggaaatgaaagc
aacaacccttccctcacatccaacacagtaacggcagaggaggctgtacagacagagggc
tcccagcagctccacctgcaacccaatgattcatctatgaagcagcagcctaagagatta
catgtctccaacattcctttccgtttccgagatcctgacctccggcaaatgtttgggcaa
tttggcaagattttagatgtggagattatttttaacgagcgaggatccaagggctttggg
tttgtaacattcgaaacaagtgcagatgctgatcgtgcaagggagaaactaaatggtaca
atcgtagaaggacggaaaattgaggtcaacaatgccactgccagagtaatgactaacaaa
aaggtggccaacccttacacaaatggctggaagctgaatccagtagttggagccgtatat
ggtcctgaattttatgcagtgacaggctttccataccccagtacaggagcagccatggcc
tataggggggctcatttgagagggaggggtcgtgctgtctacaatgcattccgagctgca
cctcctcctccacctatccctgcctatggagctgtggtctaccaggatggcttttatggg
gcagaaatatatggaggatatgcagcttacaggtatgcacagccaactggtaccgctgca
gctgcatacagtgacagttatggcagagtctatgcaacagcagacccatatcaccatacg
atcgctcctgcggccacttacagtgtaggcactatggctagcctttacagaggagggtgc
agtcgcttcactccctactag
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