Hippoglossus stenolepis (Pacific halibut): 118104227
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Entry
118104227 CDS
T08308
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118104227
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsp04515
]
118104227
Cell adhesion molecules [BR:
hsp04515
]
Cadherins
Major cadherins
118104227
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
118104227
NCBI-ProteinID:
XP_047199070
LinkDB
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Position
14:complement(28375691..28395255)
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AA seq
1153 aa
AA seq
DB search
MITVSSPVFALLLFVVVPVVRANSGDNLARKRREWILPPKPLKENVNYTHQESIVKIRSD
VLDSGILYSLEGIGANQFPFNVFVVNPKTGFIRVTQVLDREYIDTYNLSGVATKSNGLDA
ERKIDIRIKVVDENDNAPKFGVIKNGEVDELSLAGTSVMKITATDADEPGNPNSQIAYSI
IDQNPPNDMFHITKDGTILVNNPLDREKADQYTLTVKGQDLNGQSEGKSATSTVTINVRD
VNDNLPTLEKEEYEGSIEENTEGVEVMRIKAKDLDQEATDNWEAVFDIIKGNEAEYFSIR
TDPKTNEGILMLDKAVDYEDVKDLDLGLVVRNKAPFFNGSGVNTGAGIGFSGGGGEAGGA
GGGGGEGGGGGAGGSGAGGVSGGSSWQSGSTFKTYPIKINVKDKQEGPHFHPKVKAIPIS
EEGHSINMKDAIAHYFALDGDTGKPAENVRYAKGSDPDNWLNIDPETAKITLNKIPDRES
PYLVNGTYIAKVLCITDDMPSKTATGTVAIQVEDVNDHCPTLTNNIQTICTTVDAVIVSA
KDEDAFPNGPPFDFIIVPEGTKGKWQVEHLNDTAAILRVQESVWPGFYEVKLVVKDEQGK
ACPEPQMVKVQVCTCEDGMVCAKHGANGGADFGAAGIGLLFLGLLLLALIPLLLLFCQCG
GAAGVSGGFTEMPFDTKSHLINYHTEGQGENTEVPLLNMLPQMEGDMFNMGIGMVGKTSA
MAPRATFDFQKSVTSMDGINRVHQDGFAGDHREETWGMMNQPSASGFHSEFEGRESGGGG
GIYDGMALPDHFLEQYYTQKLDNGNKNLAVKNSLLVYDYEGQGSSAGSVGCCSLLESDDD
LHFLDDLGPKFKTLAEVCGGKQILTEVKQVFTPAAMNTQTSVSRFVNDEPQLPPPTQLQP
TVSNIEQTVVRDISERSDQMINETMTTKRREMANQDQMLLVQQQQPVYYTTTPRLQPTHY
VVQPQIQNTMLLAEAPANNLQGMVLVNSTQTGPSPCMVVQGQVVMSSGQYQGPHVMLVES
NGIQVDGTDRIYAGNICGSQIMMVEEDKVPAKSMKVVKGIQTCHIPGGTRQPGGLLRSQR
GLVVGGPTSNGGQLVQEAEGVSEKCDVSGSMRVLCSESSTSSGSQNRVVGSSIMSSATPT
YRKMVIQQTREIQ
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgattacagtttcttcacccgtgtttgcgctgctactgtttgtggttgttcctgtggtg
agggccaactctggagacaatctggcaagaaaaagaagagaatggattctccctccaaag
cctctgaaagaaaatgtaaactacactcatcaggaatctatagtcaagatccgatcagat
gtacttgattcaggcattttgtactcccttgagggcattggtgcaaaccaatttcccttc
aatgtatttgtcgttaaccctaaaactggattcattcgtgtgacccaagtgcttgacagg
gagtatattgatacatacaatctgtcaggtgttgctacaaaaagtaatggccttgacgca
gaaagaaaaatcgacatacgaatcaaggttgtagatgaaaatgacaatgctccaaagttt
ggagtgatcaagaacggggaggtggatgagctcagtcttgcagggacatcagtaatgaaa
atcactgcaactgatgctgatgaaccagggaatccaaactctcagattgcctatagcatc
atcgatcagaatccacccaatgacatgtttcacattaccaaagatgggacaatcctcgtt
aacaaccccctggatcgagagaaagcggatcagtacactttgacggtgaaaggtcaagac
ctaaatggccaatcagagggaaaaagtgcaactagtactgttaccattaatgtgcgggac
gtgaatgacaatcttccgactctggaaaaagaggagtatgagggcagcattgaggagaac
acagaaggcgtggaggtgatgagaatcaaagcaaaggacctagaccaggaagccacagac
aactgggaagctgtgtttgatattattaaaggcaatgaggctgaatactttagcattaga
acagaccccaagaccaatgagggcatcctaatgcttgacaaggcagtggactatgaagat
gtgaaggaccttgacctaggactagttgtaagaaacaaggctccattttttaatggatca
ggggtcaatactggagctggtataggtttctcaggtggaggaggagaagctggtggagca
ggtgggggaggtggggaggggggaggggggggggcaggtggctctggtgcaggaggtgtg
tctggaggatcatcatggcaaagtgggtctacatttaaaacttatccaatcaaaatcaat
gtgaaggataagcaggaggggccacattttcaccctaaagtcaaagccatcccaatctca
gaggaaggccactccattaacatgaaagatgctattgcccactactttgcattagatgga
gacactgggaaacctgctgagaatgtcaggtatgccaaaggctcagaccctgacaactgg
ctaaacatcgacccagaaacagccaagatcacactaaacaagatacctgacagagaatct
ccatacttggtcaatgggacatacattgctaaagtactctgcattacagatgacatgcca
agtaagacagccactggcactgtagccatccaggtggaagacgttaatgaccactgtccc
accctgaccaataatatccaaacaatctgtaccacggttgatgctgtcattgtgagtgct
aaagatgaggatgcattccctaatggacctccttttgacttcattattgtcccagaagga
actaagggcaagtggcaggtggagcatctcaatgatactgcagctatccttagggttcag
gagtccgtgtggcctggtttctatgaagtgaagcttgtagtgaaggatgaacagggcaag
gcctgtccagaaccacagatggtaaaggtccaagtttgtacctgtgaggatggaatggtg
tgtgcaaaacacggtgccaatggaggagcagactttggggctgcaggcatcggattgctg
ttcctgggcctgctgctgttagcactcattcctctgttgctgctcttctgccaatgtggg
ggggctgcaggtgtttcaggaggctttactgagatgccttttgacaccaaatcacacctc
attaactatcacactgagggccagggagaaaacacggaggtaccactgctgaatatgcta
ccacaaatggaaggagatatgttcaacatgggtataggcatggttggcaaaacttcagca
atggcgcccagggcaacttttgattttcagaagtcagtcacttccatggatgggattaac
agggtccatcaagatggatttgccggtgaccacagagaagaaacctgggggatgatgaac
cagccgagcgccagtggcttccactctgagtttgaaggcagagaatcaggaggaggtgga
ggaatttatgatggcatggctctgccagaccactttctggaacagtactacactcagaag
ctggacaatggaaacaagaaccttgcagtgaagaacagtctgttggtttatgattatgaa
ggccagggttcctctgctggctctgtgggatgctgcagcctcctggagtctgatgatgac
ctgcatttcctcgatgatcttggaccaaagtttaagaccctggctgaggtgtgcggaggc
aagcaaattctaactgaagttaaacaagtgttcactcctgccgcaatgaacacacagacc
tcagtatcaaggtttgtgaatgatgaaccacagctgccccctccaacccagctgcagcca
actgtctccaacatagaacagactgtagtcagggatatatctgagcgttcagatcagatg
atcaatgagaccatgaccacaaagagacgagagatggcaaatcaagatcagatgctgttg
gtacagcagcagcagcctgtgtactacaccacaactccacggctgcagccaacgcactac
gttgtccagccacagattcagaacactatgctactagctgaggcaccagccaacaactta
cagggcatggtactggttaacagcacccagactggaccttccccatgtatggtcgttcag
ggtcaggtagtaatgtctagtggacagtaccagggcccccatgtgatgctcgtggaaagt
aatggaatccaggtagatggcactgaccggatctatgctggaaacatctgtggctcccag
atcatgatggttgaagaggacaaggtccctgcaaagtcaatgaaagtggtgaaagggatc
cagacctgccacattccgggaggcactcgacagccaggagggcttttgagatctcagaga
ggcctggtggttggagggccaacaagcaatggagggcagctggtccaggaggcagaagga
gtgtctgaaaagtgtgatgtatctggttctatgagagtcctttgcagcgagagcagcaca
tcctctggctctcagaaccgtgtggtgggttcctctatcatgtcgagtgcaacccccact
taccgcaaaatggtgatccagcagaccagagaaattcaatga
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