Hippoglossus stenolepis (Pacific halibut): 118105395
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Entry
118105395 CDS
T08308
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X2
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04217
Necroptosis
hsp04622
RIG-I-like receptor signaling pathway
hsp04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
118105395 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118105395 (cylda)
04625 C-type lectin receptor signaling pathway
118105395 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118105395 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118105395 (cylda)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118105395 (cylda)
Peptidases and inhibitors [BR:
hsp01002
]
Cysteine peptidases
Family C67
118105395 (cylda)
Ubiquitin system [BR:
hsp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118105395 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
118105395
NCBI-ProteinID:
XP_035009007
LinkDB
All DBs
Position
1:complement(23848663..23869709)
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AA seq
955 aa
AA seq
DB search
MSSVLWSQEKPSGGFRDDWRFYMVVKECTVEKPPQKTLRIPRGSLGQACQERNSLGRTLP
QCKGKKSIRILDQTNVVLSLDERDVQELDEKLAELLFPITNCEERYALLCNNSRLVRCCD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEDECGVFVALDKLELWEDDDDGTGELEVDHVNLVEEDQDFPPLEINSRVLVQTRD
GPERGTIIFCDLLPGNESLGFYVGVDMDNPIGDWDGVIDGKLLCNFASLEHTRLVPICDV
MPEYSMQDQRLQKHSFAPRGTNSDKSSSGQSKPKSKGLGHQCGSRSKSEFYYTLNGSSVD
PPAQSKSKSTWYIDEVGEDPAKSLTDTPPDFNQSSPPSRAPPSASLSSDNKFHSLPFSLN
RKTGPIDSMSHGPLSLSVQSVMGEQPEPPSPAAPPSPRPPTPPRGQPGLEVGSLVEVKEN
PPLCGVIRWVGLPPGLPEPLAGLELEEECPGCTDGTFKGTRYFTCPPKKALFVKLKCCRP
DSRFPSLHHSSNPIERCNSIAFGGYLSEVVHENTPPRTEHDGLDVMVGKKKGIQGHYNSC
YLDSTLFCLFSFSSVLDTVLLRPRSKTDVEYYRETQELLRTEIVNPLRIHGYVCATKVMK
LRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFMDK
KDKVGVPTIQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITDLL
EDTPRECRICGGLALYECRDCYEDGDITAGKIKQFCEKCNTQVHLHPRRKTHRHGKLSVP
KELQDGTGRQGSFPRQRMELFAVLCIETSHYVAFVKYGSADSAWLFFDSMADRDGGQNGF
NIPQVSPCPEVEAYLKMTPEELHALDPKSIQGQARRLLCDAYMCMYQSPTMSLYK
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgtcctgtggagccaggagaagcccagcgggggcttcagggatgactggcgc
ttctacatggtcgtgaaggagtgtacggtggagaaacctccccagaagaccctgcggatc
ccccgcggcagtcttggccaagcatgccaggagcgcaacagcctgggccgaacactgccc
caatgcaaaggcaagaaaagcatccgcattctggaccagaccaatgtggtgctgagcctg
gacgagcgggatgtgcaggagctggacgagaagctggctgagctgctgttccccattacc
aactgtgaggagagatacgccctgctctgcaacaactctcgactagtgcgctgctgtgat
attgactgtggttccaaagtgcgcgtccagctgcgctcaggggatgaacctctgcctggt
gtggtccgcttcaagggctcgctgctccctgacagagccctctctggaatctggtttgga
gtcgagctgctggaggagggccggggccaaggtttcacggagggctcctaccagggccgc
caactcttccgctgtgaggatgaatgcggcgtgtttgtggccctggacaagcttgaactc
tgggaggatgatgatgacggcacaggcgagctagaggtggaccatgtcaatctagtggaa
gaggaccaggacttccctccactggagatcaactccagggtcctggtgcagaccagggac
ggacccgagagaggcacaatcattttttgtgacctgctgccaggaaatgagagcctgggc
ttctatgtaggagttgacatggacaatcctatcggggactgggatggtgtgattgacggg
aagctgctgtgtaattttgccagtttggaacacactcgacttgtccccatctgtgacgta
atgccagaatattccatgcaggaccaaaggctgcaaaagcacagttttgcccccagaggc
accaacagtgacaagtcgtcctctggccaaagcaaaccaaagagcaaaggattaggtcat
cagtgtggcagtaggagcaagtctgaattttactatactttaaatggcagctctgttgac
cccccagcccagtccaaatccaaaagcacatggtacattgatgaagttggggaggacccc
gccaaatcacttactgacacgccccccgacttcaaccaatcctccccgccctccagagcc
ccgccctctgcctcgttgtccagtgacaacaagttccactctctgccctttagcctgaac
cggaagaccgggcccatcgacagcatgagccatgggcctctgtccctttctgtccagtca
gtgatgggagagcagcctgagccaccgtcgcccgctgctcctccctcaccacgaccgccg
acgcctccccgaggtcagccaggcctggaggtgggctctctggtagaggtgaaggagaac
ccccctctgtgtggtgtcattcgctgggtgggtctgcctcctggcctgccggagcctctc
gccgggctggagctggaagaagagtgtcctggttgcactgacggcaccttcaaaggcacg
cgatacttcacctgcccacccaaaaaagccctgtttgtgaagctcaagtgctgccggccc
gactcccgcttcccgtccctgcaccactcctccaaccccatagagaggtgcaactccatc
gcatttgggggttacctgagtgaggttgtacatgagaacacgcccccccgcacagagcac
gatggtttggatgtcatggtgggaaaaaagaaaggcatccagggccactacaactcttgc
tacctggattcaactctcttctgccttttttcattcagttctgtactggacacggttctg
ctgaggccacgatcaaagactgacgtagaatattacagagagactcaagagctgttacgc
acagagatagtcaaccccctgcgcatacacgggtatgtttgtgccacgaaagtgatgaag
ctacggaggatactggagaaagtagaagctgcctctgggtttacctctgaagaaaaagat
cctgaggagttcctcaatatccttttccatcacatactgagggtggatccgttgctcaag
ctaaggtcggcaggacagaaagtccaggactgttacttttaccagatcttcatggacaag
aaggacaaggtgggagttcccaccatccagcagctcctcgagtggtccttcatcaacagt
gacctgaagtttgcagaggctccctcctgccttatcatccagatgccccggtttggcaag
gacttcaaaatgttcaacaagattttcccctcactagagttagacatcacagacctcctt
gaagacactccaagggaatgtcgaatctgcggaggcctggctttgtacgagtgtcgagac
tgttatgaggacggggatatcaccgctggcaagatcaaacagttctgtgaaaagtgcaat
acacaggttcacctccacccgaggagaaaaacccatcggcacggcaaactgtccgtcccc
aaggagctgcaagacggtacggggcggcagggcagtttcccccgtcagaggatggagctg
ttcgccgtgctgtgcatcgaaaccagtcactacgtggccttcgtcaagtacggcagcgca
gattcagcctggctcttctttgacagcatggcggaccgtgatggagggcagaacggcttc
aacatcccccaggtgtctccctgtccagaggtggaggcctacctgaagatgaccccagag
gagctgcacgctctggaccccaagagcatccagggccaggcccgacgcctgctgtgcgac
gcctacatgtgcatgtaccagagcccgaccatgagcctgtacaagtag
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