Hippoglossus stenolepis (Pacific halibut): 118106107
Help
Entry
118106107 CDS
T08308
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118106107
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118106107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
118106107
NCBI-ProteinID:
XP_047195559
LinkDB
All DBs
Position
4:complement(28444334..28446004)
Genome browser
AA seq
556 aa
AA seq
DB search
MEQHENQLDRERFCCLVCLDPLKDPVTTGCGHSYCMSCINTHWDKEEERGSYSCPQCGQT
FTPVLGKNTMLADLVEELKKTGLQAAPADHCYAGPEDVACDVCTGRKLKALKSCLVCLAS
YCEKHLQPHLQSAPLKKHKLVEPSEKLQENICSRHDEVMKMFCRTDQQCICYLCSVDEHK
DHDAVSAAAERTESQRELGLRRQTIQQRLQDREKDVKLLPQEEEAVNGSADKAVEDSEKI
FTELIPLLEERSSDVYQQIRSQQEAEVSRVRELQERLEQEITELKRKDHELKQLSDTEDH
NQLLHNYSSLSPLSEPTHSSSIRIRPLRNFEDVTAAVSQVRGRLQDILSETETEILQIVS
QVDVLLXQPEPETRADFLKYSQEITLDPNTAHKDLLLSEGNRKVTRMSKKQSYSDHPDRF
TDWPQVLSRESLTGPCCWEVKMRRGGRVDVAVTYKNIRRAGNSDECGFGLNDKSWSLYCY
ANSYNFSYNSIRTAVSGPLSSRVGVYLDHSAGVLSFHSVSDTMTLLHRVQTTFTQPLYAG
VTVYYDGSTAELCKLK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcatgaaaatcaactggacagagaaagattctgctgtttggtctgtctggat
ccactgaaggatccggtgactactggctgtggacacagctactgtatgagctgtattaac
acccactgggacaaagaggaggagagaggaagctacagctgccctcagtgtggacagacc
ttcacgcctgtcctggggaaaaacaccatgttagctgatttagtggaggagctgaagaag
actggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcctgt
gatgtctgcactgggagaaaactgaaagctctcaagtcctgtttggtttgtttggcctct
tattgtgaaaaacacctccagcctcatcttcagtcagctccattgaagaagcacaagctg
gtggagccctcggagaagctccaggagaacatctgctctcgtcacgatgaggtgatgaag
atgttctgccgcactgatcagcagtgtatctgttacctctgctctgtggatgaacataaa
gaccacgacgcagtgtcagctgcagcagaaaggactgagagtcagagagagctcgggctg
aggagacaaacaatccagcagagactccaggacagagagaaagatgtgaagctgcttcca
caggaggaggaggccgtcaatggctctgctgataaagcagtggaggacagtgagaagatc
ttcactgagctgatccctctgctggaggaaagaagctctgatgtttatcagcagatcaga
tcccagcaggaagctgaagtgagtcgagtcagagagcttcaagagagactggagcaggag
atcactgagctgaagaggaaagaccatgaactgaagcagctctcagacacagaggatcac
aaccagttgctacacaactactcctcactgtcaccactcagtgaacctacacactcatcc
agcatcaggatccgtcctctgaggaactttgaggacgtgacagcagctgtgtcacaggtc
agaggtcgactacaggacattctgagtgagacagagacagagattttacagattgtgtct
caagtggatgttttactgtgacaaccagagccagagaccagagctgacttcttaaaatat
tcacaggaaatcacactggatccaaacacagcacacaaagatctgttattatctgaggga
aacagaaaagtaacacgtatgagtaaaaaacagtcttattctgatcacccagacagattc
actgattggcctcaggtcctgagtagagagagtctgactggaccttgttgctgggaggtg
aagatgaggagaggaggaagagttgatgtagcagtcacatacaagaatatcagaagagca
ggaaactcagatgaatgtggatttggattaaatgataaatcttggtcattatattgttat
gcaaacagttataacttttcttacaacagcatcaggactgcagtgtcaggtcctctgtcc
tccagagtaggagtgtacctggatcacagtgcaggtgttctgtccttccacagcgtctct
gacaccatgactctcctccacagagtccagaccacattcactcagcctctctatgctgga
gttacggtttattatgatggatccacagctgagttgtgtaaactcaaatag
DBGET
integrated database retrieval system
