Hippoglossus stenolepis (Pacific halibut): 118106302
Help
Entry
118106302 CDS
T08308
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118106302 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118106302 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118106302 (usp16)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118106302 (usp16)
Peptidases and inhibitors [BR:
hsp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118106302 (usp16)
Ubiquitin system [BR:
hsp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118106302 (usp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
118106302
NCBI-ProteinID:
XP_035010619
LinkDB
All DBs
Position
4:5532213..5538955
Genome browser
AA seq
859 aa
AA seq
DB search
MGKKRAKDKSPREDEEIDLTGPNCRHIKKGTDQTLLKKLTGSSDWTSCQDCKHEENKENT
DTNQEPEEESETAAVWMCLKCGHRGCGRHSENQHAIKHYETPRSEPHCLVVSMDNWSVWC
YICDDEVQYSRTGHLSQLVTSLQKQSSAEPIKRPQKRVKEEEVLMVLEVQPQTDTVTVME
SEDAENKENKQQQKKNTKKESVVKKSSPTEDKGGVSVKGLSNLGNTCFFNAVIQSLSQTL
LLRQTLNNVAEEKMSLDIKPGASSELEPVTVQLAQPGSLTLAMCGLLNEIQESKKGVVTP
QELFTQVCKRAPRFRGFQQQDSQELLRYLLDGMRAEEHKRVSTGIVEALKQTKKSTGEEQ
LKTLVKEYEKNGFPQNLVDHVFGGELTSTIMCQQCKTVSVVTEMFLDLSLPILDEAYKKK
SLKKAFQKTSESSPDERISPALTNGDDDNDVTSGGASKYQQKKAKKQAKKQAKQQKRQQK
FEDRVTLDHLTSPSCSEGDQMDPSPGADEGETVATETHKEEGEGEAAPLTEGDTAQIPAA
DVGAQDQDTVQAEKEEKEEEGEDSETDSSATSSVSNRFTVLSKNQDSKDGVLDDGNTSDV
APEAEEDTQLVSEMEKVTLDEAFVQDSDAADQSMEVEDEPEDGREYTVVNQDPELAFHTL
ASRTSPEKMDCSVESCLFQFTEVETLTENNSLLCVTCTKQRGSKDKAAGSKNNVYTDALK
QMLISSPPPVLTLHMKRFKQSGHSISKVNRHVPFPLILDLASFCVVKCKNVTEGESQILY
SLYGIVEHSGTMRSGHYTGYVKVRPEGPKSTSNGHALDAGDAEPAKGSWFYVSDTSVQPV
SESKVQSCQAYLLFYERIL
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaacgggcgaaggacaaaagccccagagaggatgaggagatcgacctgacg
ggtccaaactgcaggcacatcaagaaaggaacagaccaaactctcctcaagaaactgaca
ggcagctcggactggaccagttgccaggattgtaagcacgaagaaaacaaagagaacaca
gacaccaaccaggagcccgaggaggagagtgaaacagcagccgtgtggatgtgtctgaaa
tgcggccacagaggctgcgggcgccactctgagaaccagcacgccatcaaacactatgag
acgccgcggtcagaaccccattgcctggtggtcagcatggacaactggagtgtgtggtgt
tatatatgtgacgacgaggtgcagtactccagaactgggcatctgtctcagctggtgacc
agcctacaaaagcaaagttctgcagaacccataaagagaccacagaaaagagtgaaagag
gaagaggtcttgatggtgcttgaagtgcagccgcagaccgacactgtgacagtgatggaa
agtgaggacgcagagaacaaagaaaacaagcagcaacaaaagaaaaacaccaagaaagag
agtgttgtgaaaaagtccagcccaactgaagacaaaggtggtgtttcagtcaagggcctg
agcaacctgggaaatacctgcttctttaacgctgtcattcagagtctctctcaaacactg
ctcttaagacagacactcaacaacgtggcagaagagaaaatgagtctggacattaaacct
ggtgcctcctcagaactggagccggtcacggtgcagttggctcagccaggatccctgact
ctggctatgtgtggactacttaatgagatccaggaatccaagaagggtgtggtgacaccg
caggagctgttcactcaagtttgtaaaagggctcccagattcagagggtttcagcagcaa
gacagccaggagctgctgcgctaccttctggacgggatgcgtgctgaggagcataaaaga
gtcagcacagggatcgtggaggctttgaaacaaacgaagaaaagcacaggtgaagagcag
ctgaaaaccctagttaaagagtacgagaaaaatgggtttccacaaaatcttgtcgaccac
gttttcggtggggaattgaccagcaccataatgtgtcagcagtgtaaaacggtttctgta
gtgacagaaatgtttttggatctttctcttcccattttggacgaggcatataaaaagaag
agcctgaaaaaagcctttcaaaagaccagtgagtcgagcccggatgagagaatcagccct
gctctgaccaacggagacgatgacaatgacgttaccagcgggggtgctagcaagtaccag
cagaagaaggccaagaagcaggcaaagaagcaagctaagcagcagaagaggcagcagaag
tttgaggacagagtcactttggatcatctcacatctccgagctgttcagagggcgaccag
atggatccttctccaggtgcagatgaaggggaaactgttgccactgagacccataaggaa
gaaggagaaggagaagcagcccctctgactgaaggagacactgcacaaatccctgccgct
gacgtgggtgcacaggaccaggacacagtccaggctgagaaagaagaaaaagaagaggag
ggcgaggattccgaaaccgactcatccgctacctcatccgtcagtaaccggtttacagtc
ttatcgaagaaccaggactcaaaggacggcgtcttggatgacggcaacacatctgacgtg
gcgccggaggcagaggaagatacacagctggtgagtgaaatggagaaagtcactctggat
gaggccttcgttcaggactcggatgctgccgatcaaagcatggaggtagaagatgagcca
gaggacggtagagagtacactgttgtgaaccaggacccggagctggccttccacacgctg
gcttccagaacgtcccccgagaagatggactgttcggtggagtcgtgcctgttccagttc
acagaggtggaaaccctcacggagaacaacagcctgttgtgcgtcacctgcaccaaacag
cgggggagcaaagacaaagctgcaggatccaagaataatgtctacaccgacgccttgaag
caaatgctgatctcttctcccccaccagtacttacccttcacatgaagagatttaaacag
agtggacacagtattagtaaggtgaaccgacacgtcccattccccctaatactggattta
gcttctttctgtgtggtgaaatgcaagaacgtgacggaaggagagtctcagatcctgtat
agtttatacggtatcgtagagcacagtggaaccatgaggtccgggcattacacgggctac
gtgaaagtacgacccgagggccctaaatccacatccaacggacatgcattagatgcagga
gatgcggagccagccaaaggatcctggttctatgtcagcgacacaagcgttcagcctgtg
agcgagagtaaagtccagagttgccaagcctacctcctcttctacgaaaggatcctctga
DBGET
integrated database retrieval system
