Hippoglossus stenolepis (Pacific halibut): 118106674
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Entry
118106674 CDS
T08308
Symbol
tsr1
Name
(RefSeq) pre-rRNA-processing protein TSR1 homolog
KO
K14799
pre-rRNA-processing protein TSR1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsp03009
]
118106674 (tsr1)
Ribosome biogenesis [BR:
hsp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
118106674 (tsr1)
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Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Motif
Other DBs
NCBI-GeneID:
118106674
NCBI-ProteinID:
XP_035011279
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Position
4:complement(8308007..8315615)
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AA seq
831 aa
AA seq
DB search
MSATEEKQQGHRAGSYKQKNKGHKHGKHRTKGEVDRENKGRVSVTALTKKQRKEQRKTDR
RHKANQLRRNKKDMVLTEKRRLGSRDGPPHLVAVVSLHAGVDAGAVTKLLRGEGAGGLLH
QERCITGISDSFGLILPRFKQRFTFLSHSTADMHSLLDVVKIADSLLFVLDSTEGWDSYG
EYCLSCLFAQGLPSHALVCQGVFDLPMKKKVDSRRALSKITEVRFPDTRLFALDSEQDGI
LLLRHLGTQRQRKLGFRSRRSHMLGQNVTFTPNSPAEGTGGNTGLGTLCVSGYVRGRPLR
VDRLVHICGHGDFQLSQIDAPPDPLPLIFTSRPVKLGKGGDTNMLDTIEDEAPVRVLMKA
DPSCRESLQNEADVDPMDGEQTWPTETELLEAEEARKSKRVMKVPKGTSDYQATWIVDED
AEENGEIEEESSDDDDDDDDMLDEAMDGEDEEINSQDAGSCCSEEEEEEEEEEVCPPERV
GADQRYDEHIDEAAEEEDLKRYREARANVHFPDEVDTPLQASAKNRFQRYRGLKSFRSSP
WDPMENLPVNYSRIFQFKNFERTRHRILAEAAQEEEEGAMAGWYVTLHIIDVPLSVMESV
QSGKPLVLVSLLPHEQKMSVMHVLVRRHPSNTEPIKSKEELVFHCGFRRFRASPIFSQHT
SADKHKMERFLRPDAPTVVSVYAPITFSPAGVLLFRQHNDGIQDLVATGSLLSCDPRRVV
LKRIVLSGHPFKINRRSAVVRYMFFNRDDIMWFKPVELRTKWGRRGHIKEALGTHGHMKC
VFDNQLPSQDTVMMNLYKRVYPRWTYDPYVPSSLPWVKREGPVEADDSDME
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctactgaggaaaaacaacaaggccacagagccggcagttacaaacagaagaac
aagggacacaaacatggcaagcaccggacgaaaggggaagttgatagagaaaacaaaggc
agagtgtcggtgacagctcttaccaaaaaacagaggaaggagcagaggaagacggacaga
agacacaaagccaaccagctacgccgcaacaagaaagacatggtcctgacagagaagcga
cggctgggcagcagggatggtcctcctcatctggtcgctgtggtgtctcttcacgctggt
gtcgacgccggtgctgttaccaaactgctgcgtggagagggcgccggcggtcttcttcat
caggagcggtgtatcaccggcatcagtgacagttttggactgattcttccccggtttaaa
caaaggttcacgtttctgagtcacagcacagctgacatgcactccctgctggatgtggta
aagattgcagacagtcttttatttgttctggactccactgaaggatgggacagctatgga
gagtactgcctctcctgcctgtttgcccagggcctccccagccatgccttggtgtgtcaa
ggtgtgttcgatctccccatgaagaagaaggttgactcgaggagagctttgtcaaagatc
acagaggtccgtttccccgacacccgtctcttcgctctcgattcagagcaggatggcatt
ttacttctcagacacctgggcacccagagacagagaaagcttggtttccgctccagacgt
tcacatatgttgggtcagaatgtcacgttcacgcccaacagccctgctgagggtacaggt
ggaaacactggcctaggaactctctgcgtctctgggtatgtccgtggtcgtcctctacgg
gttgacagactggtgcacatctgtggacatggagactttcagctcagtcagattgatgca
ccaccagacccacttcccctcatcttcacctccagaccagtgaagttgggcaagggagga
gacacaaacatgctggatacgattgaagacgaggctccggtgcgggtgctcatgaaagcc
gacccctcctgcagggagagtcttcagaatgaggcggacgtggatcccatggacggagag
cagacgtggccaacggaaacagagctgctggaagctgaagaggccaggaagagcaaacgt
gtaatgaaggttcccaaaggaacgtcagactaccaggccacgtggattgttgacgaagat
gcggaggagaatggagagatagaggaagaaagcagtgatgatgatgacgatgatgacgac
atgttggacgaggcaatggatggcgaggatgaggagataaactctcaggacgctggttca
tgttgttcagaggaggaggaagaggaagaggaggaggaagtgtgccccccagaacgagtt
ggagcagatcagcgctacgatgagcacattgacgaggcggcagaagaagaagaccttaaa
cgctaccgggaggctcgagccaatgtgcattttcctgatgaggtggacacaccactccag
gcgtcagctaaaaacaggtttcagcgctacagaggcctaaaaagtttccgctcctcgccc
tgggaccccatggagaacttgcctgtcaactactctcgcatcttccagttcaagaacttt
gaacgcactcgccaccgcattctggctgaggctgcacaggaagaggaagagggagccatg
gcgggctggtatgttacactgcacatcattgacgtgccattgtctgtgatggagagcgtg
cagtcaggcaaacctctggtgctggtgtccctcttgccccatgaacagaagatgtccgtg
atgcatgttttggtgaggagacaccccagcaacactgagccaatcaaatccaaagaggag
ctggtgttccactgtggatttcggaggttcagggcctctcccatcttctctcagcacacc
tcagctgacaagcacaagatggagcgtttcctcaggccagatgcccccactgtggtgtca
gtgtatgcccccatcacattctcccctgcaggagtcctgctgttcagacagcacaatgat
ggcatccaggacctggtggctacaggcagcctgctcagctgtgaccctcggcgtgtcgtg
ctgaagaggattgtgctgagcggacacccgttcaaaataaaccggcgctctgcggtcgtc
cgctacatgttctttaacagggatgacatcatgtggtttaagccggtggagctgcgaacc
aagtggggtcggagaggtcacatcaaagaggctttaggaacacacggccacatgaagtgt
gtatttgataatcagctgccctctcaagacactgtcatgatgaatttgtacaagcgggtg
tatcctcgctggacatacgacccctacgtgccctcatctttaccctgggtcaagagagag
ggccccgtggaggcggacgactcggacatggagtag
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