Hippoglossus stenolepis (Pacific halibut): 118112197
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Entry
118112197 CDS
T08308
Symbol
trappc11
Name
(RefSeq) trafficking protein particle complex subunit 11
KO
K20308
trafficking protein particle complex subunit 11
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsp04131
]
118112197 (trappc11)
Membrane trafficking [BR:
hsp04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
118112197 (trappc11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun-like
Gryzun
Motif
Other DBs
NCBI-GeneID:
118112197
NCBI-ProteinID:
XP_035017209
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Position
7:1029315..1047884
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AA seq
1124 aa
AA seq
DB search
MMAGSQWELPPELCCRPMAFVALTGLDVVYNAVHRAIWDAFCANRRADRVPISFKVLPGD
HEYPKCRTKRTSYEWYIPKGILKTGWMNKHLNLVPALVVLFYELDWDDPVWKEKQSECAT
KVEIVRTSLQGRNTKVAVVLIQKKTPLPPGEDLVASERAAALCNACDLSGKSLFVLPHTD
HLVGYIIRLENAFYEHAQTYYYTEIRRVKSHKEFLNKTTHQLLFVRHQFKIAFFSELKQD
TQNALKYYRTAYSLVHELRAHETNMLEIKTMAGFINYKICRLCFQHNTPLDAIAQFRKHI
DLCKKKIGSAELAFEHAAWMSKQFQSFGELFDEAIKLGLTAIQTQNPGFYYQQAACYSQE
RKQLAQQLCQVGASYPSPDPLDTQSGALDFYGQRSWRQGHQSIDPPDAEKEKTAILALQI
KEGDVPHSELIIALLSNAVAQFKKYKCPRMKSHLMVLMGEEYYHAKDYTKALKLLDYVMC
DYRTERWWELLTAILTTALRCAYLMASVKDYIIYCMELLGRASTLKQEQKGRIEKNLIKA
MMNEVPDPEPECDPASVSAARLLWNDRMALAGSNDLTIEVQDYIPFIQCKAKFHSPSFHV
DQPIQLQVFLRADCPHPVSLNKLAVSLSNQEYNQWCVVESSGQESMNLLPGKTKCYNFSF
VAKTEDVGKKIEMTGIEVMLGSDVGRCVFLSWRGAGGDAASTHEALLASRSSRRLGRAVE
TRPEMDWDSLIMQQSTMIISRVPKISVQLSHQPPALNNEMYCISLTVQSQEEGVAKDVKL
TAGLKPGQDANLSQTTHVTFDGSKVCDDSAPALLPDVPLGDLKPGEKLESCIYVRCISTG
PRVFLFHVAYSIDTTVEGRQIVCKCHKDETVTIETVVPFEVSVKFVSTKFEPLDRVAVDI
PFLLMTDILSSSPWPLLLASSSLQLLTMTSNTPELHSQLQEVVLQEGESASECFCLRCPP
LTNSNNTVATGQYLISWRRKPSSADSPLIQTTVTLPHVILESVPLYIHADLPSFGRVRES
LPVRYHIENRTAVVQEVEMAVEPSDAFMFSGLKQVRLRILPGSEQQMLYNYYPLMAGYQT
LPQLNISLPRSATTNTHTLRRFLPQRIFVKPQGRQLDDASIAAA
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaggttcccagtgggagcttcctccagagttatgttgtcggcccatggccttt
gtggctctgaccggcctggatgtggtgtacaatgctgtgcacagagccatctgggatgcc
ttctgtgccaaccgtcgtgcagacagagtccccatctctttcaaagttctcccaggagac
catgagtaccctaaatgtcgcaccaagcgaacctcctatgagtggtacatccctaaaggc
atcctgaaaacaggctggatgaataaacatctgaacctggtacctgctctggttgttctc
ttttatgaactggattgggacgatccagtgtggaaagagaaacagtctgaatgtgccact
aaagtggagattgtcaggaccagtcttcagggcaggaacaccaaggttgctgtggttcta
atccagaagaaaactcctctacctccaggggaggacctggtagcatcagagagagcagca
gctctttgtaatgcgtgtgatctgtcaggcaagagtctcttcgtactgccgcacactgac
cacttggtgggctacattataaggttggagaatgccttctatgaacatgctcaaacgtac
tactacactgagattcgtcgtgtcaaatcccataaggagttccttaacaagacaacacat
cagctgctgtttgtcagacaccagttcaagattgctttcttcagtgagctgaaacaggac
acgcagaacgctctgaagtattacagaactgcatacagccttgtccatgagctcagagcc
cacgagaccaacatgttagaaatcaaaactatggctggattcatcaactataagatctgt
cgtctgtgtttccagcacaacactcctctagatgctatagcccagttcaggaagcacatc
gacttgtgtaagaagaagattggcagtgctgaactggcctttgaacacgctgcatggatg
tctaaacagttccagtcatttggtgaactgtttgatgaagcgataaaattgggtctgaca
gccatccagacccagaaccctggtttctactaccagcaggctgcctgttacagccaggag
aggaagcagctggctcaacagctctgtcaggttggagcgagttatccttcccctgaccca
ctggacacccaaagtggagcactggacttctatgggcagagatcatggagacaaggacac
cagagtattgatcctccagatgcagagaaggaaaagacagcgattctggctctgcagatc
aaagagggagatgtaccacattctgagctgataatagcacttctcagtaatgctgttgcc
cagtttaagaaatacaagtgcccccgaatgaagagtcacctcatggtgctaatgggagag
gaatactaccatgctaaggactacaccaaagccctaaagcttttggactatgtgatgtgt
gactatcgtacagagcgatggtgggaactcctgacagccatattgaccactgctctgcgc
tgtgcttatctaatggcaagtgtcaaagactacatcatatactgcatggagctgctgggc
agagcatcaacactgaagcaagaacaaaagggaaggattgagaagaatctcatcaaagcc
atgatgaatgaggttcctgatcctgagccagagtgtgatccagcctctgtcagtgcagcc
aggttgctgtggaatgaccgcatggctttagctggatcaaatgacctcaccatagaagtg
caggactacataccattcatccaatgtaaggccaagttccactctcccagtttccatgta
gaccagcccatccagcttcaggtcttcctccgagctgactgtcctcatcctgtatcactt
aacaagcttgccgtcagcctcagtaaccaggagtacaaccagtggtgtgtggtggagtcg
tcaggtcaggagagtatgaacttattgccggggaaaaccaaatgctacaacttcagcttt
gtagcaaagactgaagacgttggcaagaagattgagatgacaggtattgaggtgatgctg
gggagtgacgttggccgctgtgtgtttctgagctggagaggggcaggtggagatgcagcc
tctacccatgaagccttgctggccagtaggtcatcacgccgattggggcgagccgttgag
acacggccagaaatggattgggacagcctgatcatgcagcagagcaccatgatcatctca
agagttccaaagatctcagttcagctgagccaccagcctcctgccctcaacaacgaaatg
tactgcatcagcctcactgtccaatcacaggaggagggtgtggcaaaggatgtaaaacta
acagctggcctcaaaccaggccaggatgccaacctaagccagaccacacacgttacattt
gatggctcaaaggtttgtgatgattctgcacctgctttacttcctgacgtccctctgggt
gacctgaaaccaggcgaaaagttggagagctgtatatatgtgaggtgtatttccactgga
ccacgggtgttcctgttccatgtggcctacagcatcgataccactgtggaaggacgacag
attgtctgcaaatgtcataaggatgagacggttaccatagagactgtggtcccatttgaa
gtgtctgtcaagtttgtatccaccaagtttgagccattggaccgtgtagcagttgacatt
cccttcctgttgatgacagacatcctctcctcatctccctggcctcttctgttggcctcc
tcctctctacagctccttactatgaccagcaacacacctgagcttcattcacagctacag
gaagtggttttgcaggaaggtgagtctgccagtgagtgcttctgtctccgctgtccacca
ttgaccaacagcaataacacggtggctacaggacagtacttgatatcatggaggaggaaa
ccctccagtgcagacagtcctctcatccagacgacagtcactctacctcatgtcatcctg
gagtctgtccctctctacatccacgctgatttaccctcattcggccgagtcagagagtct
ctaccagttcgttaccacatagagaacagaacagctgtggtgcaggaggtggagatggct
gttgaaccttctgatgccttcatgttctctggactcaaacaggtgcgtctccgtatcctc
cctggctctgagcagcagatgctgtataattactaccctctgatggctggttaccaaaca
ctgccccagctcaacatcagcctaccccgcagcgcaacgaccaacacacacacactgaga
cgcttcctgcctcagcgcatctttgtcaagcctcagggtcgacagctggatgatgcctcc
attgctgcagcttaa
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