Hippoglossus stenolepis (Pacific halibut): 118113736
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Entry
118113736 CDS
T08308
Symbol
sox4b
Name
(RefSeq) transcription factor SOX-4b
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118113736 (sox4b)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118113736 (sox4b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
FXMRP1_C_core
Motif
Other DBs
NCBI-GeneID:
118113736
NCBI-ProteinID:
XP_035019576
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Position
8:complement(11147656..11152409)
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AA seq
416 aa
AA seq
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MVQKMSHTESTAEALSFFAGDSSSDSGACMDLDPVASPLSPGSTASSTAGDKLGENPAWC
KTPSGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLRDCDKIPFIREA
ERLRLKHMADYPDYKYRPRKKVKSSASKPGSSGDKAEKLSSSSHNTSTKSSSSSRKSGSK
SPSSSKPHKSLFGSSSSSTKASPFASEHPSEHHHNSLYKSKSVSSAAKQIPDAKKPKRVY
VFGSGAANLSVSPTSSVAVPASPTLSSSADCSDPLSLYEDAASGREDGADSPGSSSSPGG
TSERHGGHTYSSRRASSPTPSGSHSSASSHSSSSSSSSEDEEFEDDLRDINPSPSFDSMS
LGSFGSSVLDRDLDLNFESGSGGSHFEFPDYCTPEVSEMISGDWLESTISNLVFTY
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagaagatgagccacacagagagcaccgccgaggcgctctccttcttcgccggg
gactcgagctccgactccggggcgtgcatggatctggacccggtcgcctcgcctctctcc
ccgggctccacggcgtcttccaccgctggggacaagctgggggaaaacccggcgtggtgc
aaaactccgagcggccacatcaagagacccatgaacgcgttcatggtgtggtcgcagatc
gagaggagaaagatcatggagcagtcgccggacatgcacaacgctgagatctccaagagg
ctggggaagcggtggaagctgctcagagactgcgacaagatcccgttcatccgggaggcg
gagcggctccggctgaagcacatggcggactaccccgactacaagtaccggccgaggaag
aaggtcaagtcgagcgcctccaagcctggcagcagcggagacaaggcggagaaactcagc
agcagctcacacaacaccagcactaagtcatcctcatcttccaggaagagcggatccaaa
tcacccagcagcagcaaaccccacaaatcacttttcgggagcagcagcagtagcaccaaa
gcgtcaccgtttgcctctgagcacccgtcagagcaccaccacaactccctctacaagtcc
aagtcggtctcctccgcggccaagcagataccggacgccaagaagcccaagcgggtgtac
gtgttcggcagcggcgcggccaacctgagcgtgagccccacgtcctccgtcgcggtcccg
gccagccccacactcagcagctcggcggactgcagcgacccgctcagcctgtacgaggac
gcggccagcggccgggaggacggagcggactcccccggcagcagcagcagcccgggcggc
acctcggagcgccacggcgggcacacatacagcagccggcgggcttcctcgccgaccccc
tccggatcccactcctcagcctcgtcccactcctcctcctcatcctcctcctcggaggat
gaggagttcgaggacgacctgcgcgacatcaacccgagccccagcttcgacagcatgtcg
ctggggagcttcggctcctcggtgctggacagggacttggatttgaactttgagtccggc
tccgggggctcccacttcgagttccccgactactgcacgcccgaagtcagcgagatgatc
tccggggactggctggagtccaccatctccaacctggtgttcacgtactga
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