Hippoglossus stenolepis (Pacific halibut): 118116216
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Entry
118116216 CDS
T08308
Symbol
rbfox2
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118116216 (rbfox2)
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118116216 (rbfox2)
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
118116216
NCBI-ProteinID:
XP_047197855
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All DBs
Position
2:15645288..15683492
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AA seq
462 aa
AA seq
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MLMSTDVASIMLPVSRGLMDRDRELDAMAGVHANPGGAPAAVRGMKRGDPEPDAQTAAVL
VDSAGAECKRPRMDGSGGIGEVGQNNDPLTLGYHGYPSLSQGSQDSAGGQEGLVPPPFSA
FPPPPPPPPQNGLALDYGGSLYAAGAVQGPVEAGGAANIAAIAANSLSAQQSDGSSQIDG
QSVVGSGGGGGGGGSIGDDTDAKGTPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIF
NERGSKGFGFVTFETSADAERAREKLHGTLVEGRKIEVNNATARVMTNKKMTTPYSNGEG
LAALPYAGWKLSPMVGAMYSPELYTVPGFPYPAAAAAAAAAASNAATFRGAHLRGRARPV
YSAVRAAVPQPAIPTYPGVMAYQDGFYGAADLYGGYAAYRYAQPTAVATPAAAAAAAAAA
YSDSYGRVYTADPYHAALAPAAYGVGAMATLYRGGYSRFAPY
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgtcgcctccatcatgctgcccgtgtcccggggactcatggac
cgggacagagagctggacgccatggccggggtgcacgccaacccgggcggcgctcccgca
gccgtgcggggcatgaagcgcggagacccggagcccgacgcgcagacggccgccgttctg
gtggactcggccggcgcggagtgcaagcgtccccgcatggacggttcgggaggaatcggc
gaggttggtcagaataacgaccccttgacccttggttaccacggctacccgtctcttagt
cagggctcccaggatagtgctggtggtcaggagggactcgtacccccacctttttccgca
ttccctccacctcctccgccgcccccccagaacggcctggccctggattacgggggcagc
ctgtatgcagcgggggccgtccagggtcccgtggaagccggcggagcagctaacattgct
gccatcgccgccaacagcctcagtgcccaacagtcagatggctcctcccagattgacgga
cagtccgtggttggctcgggaggaggaggcggcggcgggggaagcatcggggatgatacg
gacgccaaggggacccccaagcgcctccacgtgtccaacatccccttccgcttccgagac
ccggacctgcggcagatgtttgggcaatatggcaaaatcctcgacgtggagatcattttc
aacgagaggggatccaagggcttcggctttgtgacattcgagacgagcgcggacgcagag
agggcccgagagaagcttcacggcacgctggtggaaggacgtaaaatcgaggtcaataac
gccacagccagagtgatgacgaacaagaagatgaccacgccgtactcgaacggagagggc
ctagctgctcttccatacgctggatggaagttgagtcccatggttggagcgatgtacagt
cctgagctctatacagtaccagggtttccatacccagcagcagcagcagcagcagcagca
gctgcttccaacgcggcgacctttcgaggcgctcatctccggggtcgagcccggcccgtc
tacagtgcagtcagggcagctgtgccacaacctgccatccctacatatcctggtgtgatg
gcctatcaggatggtttttacggtgcggctgatctctatggtggttatgcagcgtatcgt
tacgcccagccaactgcggtagcaacacctgcggcggcggcggccgcagcagcagcagct
tacagtgacagctatggacgagtgtacacggcagacccctatcatgctgcactcgcccca
gctgcctatggtgttggagccatggccacactgtacaggggaggctacagtagatttgcc
ccttactaa
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