Hippoglossus stenolepis (Pacific halibut): 118120102
Help
Entry
118120102 CDS
T08308
Symbol
chpfa
Name
(RefSeq) chondroitin sulfate synthase 2
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
hsp01100
Metabolic pathways
Module
hsp_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
118120102 (chpfa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hsp01003
]
118120102 (chpfa)
Enzymes [BR:
hsp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
118120102 (chpfa)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
118120102 (chpfa)
Glycosyltransferases [BR:
hsp01003
]
Glycan extension
O-Glycan
118120102 (chpfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
DUF5380
Motif
Other DBs
NCBI-GeneID:
118120102
NCBI-ProteinID:
XP_035030697
LinkDB
All DBs
Position
13:complement(8170285..8179751)
Genome browser
AA seq
766 aa
AA seq
DB search
MRFSALMSVLRSVGPVIIGISLGFTLSLLSVNWTDEACRVDGTEAEDVTAAQDGQLKGAR
KPNSISSLSEGESEEQFEPRIVPYKQVQQGAPKKVFRARYISTELGMRERLFVGVLTSKN
TINTMGVAVNRTISHHLDSVIFFTGMRNRKVPHGMFVVSHGDERLIWNMFQTIRYILDHY
INEYDWFYFVQDDTYTEADRIKTLVDHLSMERELYMGSPEEFIGGEMEGKYCYGGFGYLL
SRSLLLRLQPFLENCRNDILSARPDEWLGRCIIDYTSTNCVSEYEGRQYQHYELGKNSDP
SKEQNEHFKNALTVHPVSDPEQMYRLHRYFTEIELQKTYDEIAKLQAEIKNVSVVAFDGN
RSSQWPVGINPPFEPKSRFEVLKWEYFTEEEIYLCIDGSPKCELRGVDRMDVADVIDTAV
GELNKKYKPVLHLKKQQLINGYRRFDPVRGMEYTLDLQLEVVNQKGHSRSITKRVHLVRP
LSQIEIIPMPYVTEATRVHIIIPLTLKDQGFVQHFLEVFASNAFETSENAILTFLFIYDP
VEAQQVNQNDIFASVKTQINTYERKYPTVKIPWISVKTETPSQIKFMDIISKKHPVDTLF
FLAGVNTNINTEFLNRCRMNSINNWQVFFPIHFQDYNPDVAYHNQPHPATVDLIKDAGHF
DRLSFEESCFYNSDYMSTRTRMVSDVQENEEILETTDIYDMFVKYSGLHVFRAVEPALHQ
QYRYQTCNPRLSEDIYHRCVQSNLEGLGSRSQLAMLLFEQEQGNST
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgaggttttcggcgttgatgtcggtgctgcggtctgtcggcccggtgatcatcggcatc
tctctggggttcacgttgagtctgctgagcgtgaactggacggacgaagcgtgtcgcgtg
gacgggacggaggcggaggacgtgaccgcggcgcaggacggacaactcaaaggagcccgg
aagcccaactccatctccagcctcagcgagggggagtccgaggagcagttcgaacccagg
atcgtcccttataaacaagtccagcagggcgcccccaagaaagtgttcagggcgaggtac
ataagcacagagttggggatgcgtgagcgtctgtttgtcggggtcctgacatccaaaaac
accatcaacaccatgggcgtagccgtcaatcgcaccatcagccatcacctggactctgtc
atcttcttcaccggcatgcgcaaccgcaaagttccccacggcatgtttgtggtttctcat
ggagacgagagactgatctggaacatgtttcagaccatcagatatattttagaccactac
atcaatgaatacgactggttttacttcgtccaagacgacacctacacggaggctgacagg
atcaagaccctggttgatcacctgagtatggagagggagctttacatgggcagtcctgag
gagttcatcggtggggagatggaagggaagtattgctacggggggtttgggtacctcctg
tcgcgttccttgctcctgcggctccagcccttcttggaaaactgtaggaacgatatcctg
agcgccaggcctgacgagtggctcgggagatgcatcatcgattacaccagcacaaactgt
gtcagtgaatatgaggggcgtcagtaccaacactacgagttgggaaaaaactctgatcca
agtaaagagcagaacgaacatttcaagaacgctctgaccgtccatccagtttctgaccct
gaacagatgtaccggctgcatagatacttcactgagattgaactgcagaagacttacgat
gagattgctaaactgcaggccgaaataaagaacgtgagtgttgttgcttttgatggcaac
cgaagctcccagtggccagtggggatcaatccaccttttgagcccaaatcccggtttgaa
gtgttgaagtgggaatactttacagaggaggagatatatttgtgcattgatggctctccc
aagtgtgagctgcgtggcgttgaccgcatggatgtggctgatgtcattgacacggccgta
ggagagctgaacaagaagtacaagcctgttttacacctgaagaagcagcagctaattaac
ggctacaggcgcttcgaccccgtccggggcatggagtacaccttggaccttcagctggag
gttgtaaaccagaaaggtcacagccgttctatcactaagagggttcatctggtgcgacct
ttaagccaaatagagataattcccatgccctatgtcactgaagccacaagagttcacatc
ataatacctcttactctgaaggaccagggctttgtccagcatttccttgaagtctttgcc
tcaaatgcctttgagacaagtgaaaatgctatcctaacattcttatttatttatgaccca
gtggaggcgcaacaggtgaatcagaatgatatatttgctagtgtaaagactcagattaat
acttatgagcgcaaatatcccacagtgaaaataccatggataagtgtcaagacggaaaca
ccatcccagatcaagttcatggacatcatctccaagaagcacccagttgacacgctgttc
ttcttggctggcgtcaacacaaatatcaatactgaatttctgaaccgctgtcgcatgaat
tccataaacaactggcaggtgttcttccccatccatttccaggactacaatccagacgtg
gcctatcacaaccaaccgcatccggccacagtcgatctgatcaaggacgcgggccacttc
gaccgcctgtcatttgaagaatcctgtttttacaactccgactacatgtcaacgcgcaca
cgaatggtgtcggacgtccaggagaatgaggagattctagagacaacggacatctacgac
atgttcgtgaagtactcgggtctgcacgtattcagggcagtagagccagcattgcaccag
cagtaccgctaccaaacttgcaacccgagactcagcgaggacatctatcacagatgtgtt
cagagtaacttggaaggtctcggctctcgctcgcagctcgccatgctgctgtttgagcaa
gaacaaggaaacagcacttga
DBGET
integrated database retrieval system
