Hippoglossus stenolepis (Pacific halibut): 118121203
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Entry
118121203 CDS
T08308
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hsp01002
]
118121203 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118121203 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118121203 (usp13)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118121203 (usp13)
Peptidases and inhibitors [BR:
hsp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118121203 (usp13)
Ubiquitin system [BR:
hsp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118121203 (usp13)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118121203 (usp13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
118121203
NCBI-ProteinID:
XP_035032828
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All DBs
Position
14:13170618..13205185
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AA seq
865 aa
AA seq
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MAADLGELLVPYMPTIRVPKTGDRVFKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAIPRRRNGKVFLDLELNRDFNGEDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKPEPESWEEEIQVSRHARSLRQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGTLLCGKWFFDGSGGNGHALEHYRATNHPLAVK
LETITPDGADVYSFEEEEAVLDPQISDHLAHFGIDMLQMLQKRTENGHHTDNNARPRVSE
WEVIQESGMKLKAVFGSGYTGIKNLGNSCYLGTVVQVLFSIPDFQRMYVGNLQRIYDYSP
LDPSQDFATQMAKLGQGLLSGQHSKPPMKSELIEQVMKEEYKVLNWHQQKGISARMLKAL
VGRGHPEFSSNRQQDAHEFLLHIINLVERNSAGSENPSDVFRFLVEERIQCCQSRRVRYA
ERVDYCIQLPAPIEAATNREELLAYETKRRDAEENMKAPPEPVRARIPFTACLQAFTEPD
NVPDFWSSALQAKSAGVKTSRFASFPEYLIVQVKKFTFGVDWVPKKLDLAIDVPDFLDLN
RLRATGLQAGEEELPDLMPPIVLPEDTRDNSMGSVDSPEIDEVAVMQLAEMGFPLEACRK
AVYYTGNMGPEMAFNWIIAHMEEPDFAEPLALPSMMDPGPSISDSPMGAATPLANSPPEE
SIAILTSMGFPRSHSIQALKATNNNLERALDWIFTHPEEEESDVLSDMADTEPNDNAFSN
ANSHSDSTLSPDRETSGPRVKDGPGRYELFAFISHMGASTMSGHYVCHIKKEGRWLIYND
HKVCLSERPPKDLGYIYFYHRLSSS
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctgggagagctgctggtcccctacatgcccaccatcagggtgcccaag
accggagacagggtgttcaagagcgagtgcgccttctccttcgactccccggagtctgag
ggaggcctgtatgtgtgtatgaacacattcctgggcttcggacgagaacatgtggagaga
cattatcgcaaaacaggacagagcgtttacatgcacctcaagcgacatgttaaagagaaa
gccacaggagctgcaggtggtgctatccccagacggagaaatggaaaagtctttctagat
ttagagctaaaccgtgattttaacggagaggactatgaatacgaagatgaggccaagctc
gtcatttttccagaccacttcgagatccccttaccaaatattgaggagttgcccgctctg
gtgaccatcgcctgtgatgcagtgctcaatgcaccatcagcctacaagaaaccagaacct
gagtcttgggaggaggagatccaggtgtccagacacgccaggagcctcagacagctggat
aacggggtcaggatcccacccagtggctggaagtgtcagaagtgcgagatgagagaaaac
ctgtggctgaacctgacggatggtacactgctctgtgggaagtggttctttgatgggagt
ggaggaaacggccacgctctggagcactacagagcgaccaaccaccccctggctgtcaaa
ctggaaaccatcaccccagacggagcagatgtctattcgttcgaagaggaagaagccgtg
ttggaccctcaaatatcagaccacttggcacactttggaatagacatgttacagatgctg
cagaaaagaacagagaacgggcaccacacagataataatgcacgtccgcgagtcagtgaa
tgggaggtgatccaggagtccggcatgaaactgaaggcagtgttcggttctggttacaca
gggatcaagaacctgggcaacagctgctaccttggcacagtagtgcaggttctcttcagc
atcccagacttccagaggatgtatgtgggaaatcttcagaggatatatgactattcaccc
ctcgacccctcccaggactttgccacacagatggctaaactgggacagggactgctctca
ggccagcactccaaaccacccatgaaatctgagctcattgaacaggtgatgaaagaagaa
tacaaggtattaaactggcaccagcagaaaggcatctcggcgaggatgctgaaggccctg
gtcggccggggacacccagagttctcctcaaacagacaacaagatgcccacgagtttctc
ctgcacatcatcaacctggtggagaggaacagtgcaggctcagagaatccaagtgacgtc
ttccgcttcctggtggaggagcgaattcagtgctgccagtcgcgccgggtgagatacgct
gagcgggtggactattgcatccagctgccagcccccatcgaggctgccaccaatcgagag
gagctgctggcatacgagaccaagaggagggacgctgaggagaacatgaaggctcctcct
gagccagtgagggcacggatccccttcaccgcctgcctgcaggccttcaccgagccagac
aacgtcccagacttctggagctcggcgctacaggccaagtcagctggagtcaaaacttcc
cgctttgcctccttcccagagtatctgattgtgcaggtcaagaaattcacattcggggtc
gactgggtgccgaagaaactagacttggccatcgatgttccagacttcctggacctgaac
cggttgcgggccacagggcttcaggcgggtgaggaggagctgcctgacctcatgcccccc
attgtgctccctgaagacaccagagataactcaatgggctctgtcgactctccagaaata
gacgaggtggcagtgatgcagctggcagagatggggttcccgctggaggcctgcaggaag
gcggtgtactacacaggcaacatgggtcctgagatggctttcaactggatcatagcccac
atggaggagccagactttgccgagcctctcgctctgccctccatgatggatcctggtccc
tccatcagtgacagccccatgggcgccgccacgcctctggccaactcaccccccgaggag
agcatcgccatcctcacttctatgggcttcccccgcagtcacagcatccaggcactcaaa
gccacgaacaataacctcgaacgagcactcgactggatcttcacccatccggaggaggag
gagagtgacgtcctctcagacatggccgacacagagcccaacgacaacgctttctccaac
gccaactcgcacagcgactccacgctgtcaccggacagagaaacatcgggcccgcgggtc
aaagacggaccaggacgttatgagctctttgccttcatcagccacatgggagcatccaca
atgtctggacattatgtttgtcacatcaaaaaggagggaaggtggctgatctacaacgac
cacaaagtgtgtttgtcagaaaggcctcctaaagacttgggctacatctacttttaccat
cgactgtcgagcagttaa
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