Hippoglossus stenolepis (Pacific halibut): 118122106
Help
Entry
118122106 CDS
T08308
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118122106 (supt6h)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118122106 (supt6h)
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
118122106 (supt6h)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
118122106 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Spt6_S1
S1
Tex_N
HHH_9
HHH_3
Tex_YqgF
SH2
Motif
Other DBs
NCBI-GeneID:
118122106
NCBI-ProteinID:
XP_035034459
LinkDB
All DBs
Position
15:complement(18791905..18806982)
Genome browser
AA seq
1753 aa
AA seq
DB search
MSDFIESEAEESEEEFAEKDLKPKKTQRFLEEDDEEEEENTEDQDERGNLRGLIDDGDEE
GEEGEEAGKSGSGAGSDSEEEVRHRRKKRNYDDYLDDDDLDLIEENLGVKVKRRKKKYDR
VKTLEDDDDDEKDLIADEIFHGDADGDLEEGEAVDEPLQHADDDEEGEDEESDIDDFIVD
DDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADAYDQGEEEEEDQDEEGWDR
PKKQTKRRQGRKSIFEIYEPSELESSHMTDQDNEIRTTDMPERFQLRSIPVKPAEDDELE
EEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQFEVPF
IAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQKMQSYQFEQISADPDKP
LADGIRPLDTSDLERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNSAKTSKKRLRKIKEV
TEDGEEEEVEVEEEEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGENLRD
SYQRHETEQFPAEPVELAKDYVCSQFSTPEAVLEGTRYMVAMQIAREPLVRHVLRQTFQE
RAKINIKPTKKGKKEVDEAHFAFSFKYLKNKAVKELNGDQFLKMCLAEEEGLLSIDICID
LIGVKGFTGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALNQFLYPQMAKELKSK
LISEAKESIVRSCCRRLYNWLKVASYRPDQQVEEDDDLMDESQGKGIRVLGVAYAPSRDT
PVFCALINGEGEVVDFLRLPYFMKRRNAFREDEREKKAHDIETLKKFLSSKKPHVVAVAG
ESRDAQMIMEDIKRAVSELEQESSLPAVGVELIDNELATLYMNSKKSEVDFRDYPPLLRQ
AVSIARKIQDPLVEYAQVCSSDEDILCLKLHPLQEQVVKEDLLSALYCEFINRVNEVGVD
VNRAIAHPHTQSLVQFVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCA
GFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEI
LENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVPYRVPNTEEVFNL
LTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDSTGLWQCPFCQQDNFPELSEV
WNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKIDI
EKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDHESEDQKQEEDLKKKQQRTPYIKRVIAH
PNFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENAF
SLGHTLWIISEEFEDLDEITARYIQPMASFARDLLGHKYFHECSGGSKEKMEELLVKTKR
EKPTFIPYFVSACKELPGKFVLGYQPRGKPRVEYVTITPDGFRYRSQIFATVNGLFRWFK
DHYQEPVPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFSAIAAVTG
QGQNPNTTPAQWGSSQYGYGGSTGGGGGSSSAYHVFATPQQPIATPLMTPSYSYTTPSQQ
ALGTPQYPSSTPQSSHSHTHGPPQLPHHSHHSSHHGHSSGTPSSSTSSRGRTPQQQQQQP
SQQPQPPQPKPSGSNASAVDWGKMAEQWLKEKEAEGRKKTPRMTPRPSPSPMIESTPMSI
AGDATPLLDEMDR
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacttcattgagagcgaggccgaggagtcggaggaggagttcgcggagaaagac
ctaaagcccaaaaaaacccagaggtttctggaagaagatgatgaagaggaagaagaaaac
acagaggaccaagatgagcggggaaatttgcgtggactcattgatgatggagacgaggag
ggggaggagggggaagaagctggaaaaagtgggagtggagcggggagcgactcggaggag
gaagtcagacatcgacgaaaaaagagaaattatgatgactacctggatgatgacgatctt
gacctaattgaggaaaacctgggtgttaaagtgaaaagaaggaagaagaaatatgaccgt
gtaaaaacactggaagatgatgatgatgatgagaaagacctaattgcagatgagatcttt
catggggatgcagatggtgatctggaggaaggagaagctgtggacgagcctctccaacat
gcagatgacgatgaagagggagaggacgaggagtcagatatagacgattttatcgtagat
gatgatggacagcccatcactaaaaagagggggaagaagttctcaggatacacagatgca
gccctccaggaggcccaggagattttcggtggcgactttgacttcgccgactttgatgcg
gacgcctacgaccagggtgaggaggaggaagaggaccaggatgaggagggctgggaccgg
cctaagaaacagactaagaggaggcaggggaggaagagtatctttgagatctatgagccc
agtgagctggaaagtagtcacatgaccgaccaggataatgagatccgcacgacagacatg
cccgagaggttccagttacgctccatcccggtgaaacctgctgaggatgatgagctggag
gaggaagccgagtggatctttagacatggcttctccactcttacaatatccatgcaggag
agcacagattacctagacagagggacaaccacaaacttcagcaggaaaggtcccagcact
attgccaagataaaagaggccctcaactttatgaggaatcaacaatttgaggttcccttc
atagctttttacaggaaagaatatgtggaaccagagttgaacatcaatgacctgtggaag
gtgtggcagtgggatgaaaagtggactcagctgaagacccggaagcagaacctgacccgt
ctgtttcagaagatgcagtcctaccagtttgagcagatctctgctgatcctgacaaacct
ttggccgacggcatccgtcctctggacacttctgacctggagaggctgaaagatgtgcag
actcttgaagagctgggtgatgtgtacaaccactttctactctactatggccgagacatc
cccaagatgcagaactctgccaaaaccagcaagaagaggctcaggaagatcaaggaagtg
acagaggatggtgaagaagaagaagtggaggtagaagaagaggaagaagaacagaaagga
cctgaccttaagctggcatctcgtcgagatatgtacagcatctgtcagagtgtaggactt
gatggtttggctaagaagtttggtttaactccagagcagtttggagaaaatctgagagac
agttaccagcgtcacgagacagaacaattccctgctgagcccgtagaactagccaaagat
tatgtgtgcagtcagttcagcactcctgaggcagtgctggaaggaacaaggtacatggtg
gccatgcagattgctcgggaacctctagtcagacatgttctccgacagacattccaggag
agggccaagatcaacatcaaacctacaaagaagggcaaaaaggaggtagatgaggcacat
tttgccttctccttcaagtatcttaagaacaaggccgtaaaggagctgaatggagatcag
ttcttgaagatgtgcctggcagaggaagaggggctgctttccattgacatctgtatcgac
cttataggggtcaaaggatttactggggaccagacatactttgacgagatcaaacagttc
tactacagggatgagttcagtcaccaggtgcaggagtggaacaggcagcgaactttagcc
atagagagagctctcaatcagttcctctatcctcagatggccaaggagctcaagagcaaa
ctgatctctgaggccaaagagagcatcgtcaggtcctgctgtcgccgactgtataactgg
cttaaggtggcttcttacagaccagatcagcaagttgaggaagacgacgatctgatggat
gagagtcagggcaaaggaattcgggtactgggtgtggcatacgcaccaagcagagataca
ccagttttctgtgctctgatcaacggggaaggagaggtggtggacttcctgcgtctgccc
tacttcatgaagaggaggaatgctttcagggaggatgagagagagaagaaggcccacgac
attgagactctcaagaagtttctgtccagcaagaagccgcatgttgtagctgttgctgga
gaaagccgagacgcccaaatgatcatggaggacatcaagagggccgtcagcgagctcgaa
caagagtcctctctgcctgctgtgggagtggaactgattgacaatgaactggccacgttg
tacatgaacagcaagaagtctgaggtcgattttagggattacccccctttgctgcgacag
gctgtgtcgatagccaggaagattcaggatcccctggtggagtacgctcaggtctgcagc
tcggacgaagatattctctgcctcaaacttcacccgttacaggaacaagtggtgaaggag
gatttgctttctgctctttactgtgaattcatcaaccgtgtcaatgaagttggagtggac
gtgaatagggcgatcgctcatcctcacactcagagtctggtccagtttgtctgtggtttg
ggaccaaggaagggctcccacctccttaagattctgaagcagaacaacactcgtctggaa
aacagaacccagctcgtcacaatgtgtcacatgggaccaaaggtttttatcaattgtgct
ggtttcatcaagatcgacactgcgtcccttggagacagtacggactcctacatcgaggtt
ctggatgggtctcgtgtccaccctgagacatacgagtgggctcgtaagatggctgtagat
gccctcgagtatgacgagtcagcagaggacgctaacccagccggagccctggaggaaatc
ttagaaaatccagaacgtctcaaagatctggacttggatgccttcgctgaagagctggag
agacagggttacggcaacaagggaatcactctgtatgatatccgtgcagagctaagctgc
agatacaaagacctgagagttccctacagggtacccaacaccgaggaggtcttcaacctg
ctcaccaaggagacgccagagaccttttatatcggtaagctgatcaccagtatagtaact
ggtatagctcaccggcggccgcagggcgaaagctatgaccaggccatacgtaacgattct
acaggtctgtggcagtgtcccttctgccagcaggacaacttccctgagctcagcgaggtg
tggaatcactttgacagtggttcgtgtccaggtcaggccattggggtgcggtccagatta
gataacggcgtccagggattcataccaaccaagtttttgagtgacaaagttgtgaaacac
ccagaggagagagtcaaggtgggcatgacggtccactgccgcatcatgaaaatcgacatt
gaaaaattcagcgttgacctcacatgccgcacgtccgatttgatggacaaggccaatgag
tggaagctccccaaggacagctactatgactttgaccatgagtctgaggaccaaaaacag
gaggaggacttaaaaaagaaacaacaacgaacaccatatataaagcgtgtgattgcccac
cccaacttccacaatattagtttcaaccaggcggagaagatgatggagaccctggaccag
ggagacttgatcatcaggccgagcagcaagggagagaaccacctcaccgtcacctggaaa
gtggctgacggtatctaccagcacgtggacgtgagagaagaaggcaaagagaatgcgttc
agcttgggacacactctctggatcatcagtgaagaatttgaagatctggatgaaatcact
gctcggtacattcagccaatggcgtcatttgcccgggatctgctcgggcataagtacttc
catgagtgcagtgggggaagcaaggagaaaatggaggagttgcttgtcaagacaaagagg
gaaaagcctacttttattccttactttgtttcggcttgcaaagaattgcccggaaagttc
gtcctgggctatcagcctcgtggaaaaccacgggttgagtatgtgaccatcaccccagat
ggcttccgctaccgctcacagatatttgctacagtaaacggactattccgttggtttaag
gaccattaccaggagcctgtaccaggcatcacccccagcaacagcagccgaacgaggacg
cctgcgtccctcaatgccacaccggccaatatcaatattgcagacttgacacgagctgtc
aacgccctcccacgcaacatgacctctcagatgttcagtgccatcgctgcagtcacaggc
cagggccagaaccccaacaccacccccgcacagtggggctccagccagtacggctacggt
ggcagcacaggaggaggaggagggagctcctctgcttatcatgtatttgccacacctcag
cagcccatcgcgacgcccttgatgacacccagctactcgtacaccacaccgagccagcaa
gcactgggcactccccagtaccccagctccaccccgcagtcctcccactctcacacacac
ggccccccacaactgccacaccacagccaccatagcagtcaccatggccactcgtccggc
acaccgtcatcctccacctcatccagaggacggacgccgcagcagcaacaacaacagccg
tcgcagcagccgcagccgccgcagccaaagccaagcggaagcaacgcctccgccgtggac
tggggcaagatggcggagcagtggctgaaggagaaagaggcagaggggcggaagaaaacc
ccgaggatgacgccacggccgtcacccagccccatgatcgagagcacacccatgtccatc
gccggagacgccacacctcttctggatgaaatggaccgatag
DBGET
integrated database retrieval system
