Hippoglossus stenolepis (Pacific halibut): 118122282
Help
Entry
118122282 CDS
T08308
Symbol
ftr82
Name
(RefSeq) finTRIM family, member 82
KO
K12006
tripartite motif-containing protein 16
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsp04121
]
118122282 (ftr82)
Ubiquitin system [BR:
hsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118122282 (ftr82)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_10
zf-RING_6
LMBR1
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
118122282
NCBI-ProteinID:
XP_035034816
LinkDB
All DBs
Position
15:complement(5346810..5352423)
Genome browser
AA seq
576 aa
AA seq
DB search
MADPTSPDYFSCTLCLNLLKDPVAIPCGHSFCMDCISGYWNEADYTGIYICPQCKITFTQ
RPVLRPNATLSMVAEKIKKSGLNLNLNMSQGNIYAGPNDVPCDFCTGKKLKAVKSCLNCL
ASYCEKHLKPHYESATFKRHKLVEVLGNLDRKICPQHQKSLELFCRTDQMCICAICTVSE
HKGHDIVSAEAERGEKQKLLGISQAEIRQKGQEREKELEELKTAVDSLKNSAQRAMVESQ
KMFEDMIRSIERMRSEVTKLIGINEKAAFNQAEALIERLELEIDELKKKESGLKQLYSTE
DHIHFLQNFNYLCTPTDDGFIPKVTVNPDFSFGAVRKAVSEIKDRLEEFGREELLKISKS
VSEVPVYTTESRTLDRKSRAAGKEMAVNNLLPAEPKSRADFVKYFCQLKLDSSTAYKELF
ISENSRKVIRTRDLQPYEDIPERFDSFAQVLCREALSGGRYYWEIEWSGEFSIGVAYRSI
SRKGKGSLCLLGYNDKSWSLLCSDSGYSAWHNRVDKSINAPHSPRIGMYLDHTAGVLAFY
SISNTMTLLHRFETTFVEPLYPGFGVGTSVKICNIK
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggctgatccgacgtctccagattacttcagctgcaccctgtgtctgaacctcctgaag
gaccccgtggctatcccatgtggccacagtttctgcatggactgcatcagtggctactgg
aatgaggctgactacacagggatttacatttgtccccagtgtaagatcacattcacgcag
aggcctgtgctccgccccaacgccactctgagcatggtggcagagaagatcaaaaagagc
ggcctgaacctcaacctcaacatgtcccaggggaatatctacgccgggccgaacgacgtc
ccctgcgacttctgcactgggaagaagttaaaggctgtgaagtcctgtctgaactgtctg
gcgtcctactgcgagaagcacctgaagcctcactatgaatcagccacgttcaaaaggcac
aagctggtggaggtgctggggaacttggacaggaagatctgcccgcagcaccagaagtcc
ctggagctcttctgtcgaacagaccagatgtgtatctgtgctatctgcacagtcagtgag
cacaagggccatgacattgtctctgctgaggcagagagaggggagaaacagaaactattg
ggcatctcccaagcagagattagacaaaaaggccaggagagggagaaggagctggaggaa
ctgaagactgcagtggattcactgaagaactcagcccagagagccatggtggagagccag
aagatgtttgaggacatgatccgctccattgagaggatgaggtcggaggtgaccaagctg
attggcatcaacgagaaggccgctttcaaccaggccgaggctttgatcgagcgactggaa
ctagagattgatgagctgaagaaaaaggagtcggggctcaagcagctgtacagcacggag
gaccacatccacttcctgcagaacttcaactacctctgcactccaaccgatgatggcttc
attcccaaagtgacagtaaaccctgacttttcctttggggctgtcaggaaagctgtgtct
gagatcaaggatcgcctcgaggagtttggcagagaggagctgcttaagatctccaagtca
gtgagtgaggtgccggtgtacactacagaaagtcggacattggacagaaagagcagagct
gcaggcaaagaaatggcggtgaacaaccttcttcctgcagagcccaagagcagagcagac
tttgtgaaatacttctgccagctgaaattagactcgagcacagcttacaaggagctgttc
atctctgaaaacagcagaaaagtcatccgcaccagggacctgcagccctatgaagacatc
ccggagcggtttgacagctttgcccaggtgctgtgccgggaggccctgtctggtggacgc
tactactgggagatcgagtggagcggggagttctccatcggagtggcctacaggagcatc
agtcgaaagggcaaaggctcgttgtgcctgctgggctacaacgacaaatcctggagtctc
ctctgctccgactcgggctactctgcctggcacaaccgggtggataagtccatcaacgcc
ccccactcccccaggataggcatgtacctggaccacactgcgggtgtgctggcattttac
agcataagcaacaccatgaccctcctgcacaggtttgagaccacatttgttgagcccctc
tatccaggctttggagtcgggacctcagtcaagatctgcaacatcaagtga
DBGET
integrated database retrieval system
