Hippoglossus stenolepis (Pacific halibut): 118122426
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Entry
118122426 CDS
T08308
Symbol
pom121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121
KO
K14316
nuclear pore complex protein Nup121
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118122426 (pom121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsp03019
]
118122426 (pom121)
Messenger RNA biogenesis [BR:
hsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118122426 (pom121)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
118122426
NCBI-ProteinID:
XP_035035030
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Position
15:13376062..13384350
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AA seq
1176 aa
AA seq
DB search
MRVLRRRVAAMSPREKRLVLLSFLGVIGLALYYFPTFLYASLIIAVCCIVCYYHSGGPLP
ARLGLNPRAGLNAPGVLRRWLLGWGVTGVSVAARGRTRSSGGDRAEHREPVGHFRQRPGE
SGIYRGEALASDSFLFSPRDFLMGSYIGKPESPTAEPGRPRAARNPRELLREKLSRPNHA
VYTPNRRLSFAGEPLGKVGRFTITPQRHYPLQQPGASSVGILPPVGWDGFRKKNILSPRN
SPAALSPVTVKIARPNHSTPSLDHLSCARLPRAPADPCSRESVLKVLKESRKREVEDEDK
SLTTEQKSKRRRNDSEGSAHSAFEPLLPNGTLSQLVPKPGSLKRGMSSLAEDSIMKRSRT
SSISSGSGAHAPRGTPGTRRNPINSSYSSSLGLSQWKKRSTPSSPLSSPGSSRCQTPEGV
AKRAREDDRQSPSAAFSVRSEQTASNKAPATSKLTTVPKVPVITAIDSTGSGGKRKRKIQ
LVPSHRDDQISLPPPPELGYSITVKDLDEEKKAAISKIQKVLETPAPEPEKSVAPPTTTS
SQTTASSTSSTATTTLSSLLAAPLPTASSAAIPVINLDPSPGSSVSTAPAASNPLLEALK
MKAGTPASSTPAASPTIVSVSTTPVQPSGFNLKATTAVDSQRPPPAYPSQSSTAGVEQPS
AFTQVLSQVMKSSSSTPPVIGPTLFRLASQSSTLSAPTASNPITAANAPASSSESVSNTN
PLLASGFKPIFAVTTTTSASATSAPESKPPVQGFKPIFGGATAGTGFGQPATLTTTNPVS
AVSATSTSSMFGVSTSSTTAAPSVFPGLTNPLTGTVSTSAITTTTQPATQPSVKSLFGSW
STPSTTSTSSATVQAPNTGSTFQFGTATTTAAAAPAPAAAATTTSSNGGFTFGATQPDPQ
AANQKAFAFGQPAPSQNSTTASFGGFAMANAAPTTATAPTQSTFPFGKSSFGPTATQSNF
GSSAAQSKPFNFGSNAASSTPAPNPAQASFNFGSAAATTGATFGTPAKPAFGASSTGFGF
GGSTAPPAAPPAAPSFGAATQTQSSSSATFTFGNAAPQPAASGPSQPAPSGFNFGAAMPC
PQFGTPVANNPAPQMGGFNFGAAAADKSAFGTSTPSFGQSAAVGPIPFGSPGTPVQGFNS
VPFGSPATPSFSIGAGTKPSGARQRLQARRQHNRKK
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcctccggcggcgcgttgccgccatgtcacctagagagaaacgtttagtgctt
ctctcttttttaggcgtaattggtctcgctctttattattttcctacttttctttacgcg
tctttaattatcgcagtttgttgtattgtgtgttactaccacagcggaggaccgcttccc
gccaggctaggcctgaatccgcgggctggactgaacgccccaggtgtgctccggcgctgg
ttgctgggttggggggtgaccggcgtgtcggtggccgcgcgggggaggacgaggagcagc
ggcggcgacagagccgagcaccgggaaccagtgggacatttcagacaaaggcccggcgag
agcgggatttatcgaggggaagctttagcaagtgactcgtttctgttcagtccccgggat
ttcctcatgggcagctacattggaaaacccgaaagtcccacggctgagccggggaggccg
agggctgcgagaaacccccgagagctgctgcgggagaagctctccagacccaaccatgct
gtctatacccccaacaggaggctgtcgttcgctggggagccacttggtaaagtgggcagg
ttcaccattaccccccagcgtcactacccactgcagcagccgggcgcctcgtcagtgggc
atcctacctcctgtcgggtgggacggcttcagaaagaaaaacatcctcagccctcgtaac
tcgccggccgccctcagtcccgtcactgtgaagattgccaggcccaaccacagcaccccc
agtttggaccatctaagctgtgccaggcttcccagggcccctgcagacccttgctccaga
gaaagtgtcctcaaggtgttgaaggaaagtcgcaagagagaagtggaggatgaggacaag
agcctcacgactgaacagaaaagcaaaagaagacgtaatgacagtgaaggaagtgcccac
tctgcttttgagcctcttctgcccaatgggacactgtcacagttggtccctaagccagga
agcctgaaaagagggatgtcctcactggcagaggattccatcatgaagaggtctcgcacc
tcctccatcagctctggcagtggggcccatgcccctagaggaaccccaggcaccaggaga
aaccccataaacagctcctacagttcatcactaggccttagccagtggaagaaacggtca
acacccagctcccctctctccagccctggatcttctcgctgtcagactccagagggagtc
gccaaaagagccagagaggatgaccgacagtcccccagcgcagcattctctgtgaggtca
gagcagacagcatccaacaaggcacctgctacttccaaactgaccacagtcccaaaggtc
cccgtcattaccgcaatagactctactggtagtggtgggaagagaaaaaggaagatccag
ttggtgcccagccaccgtgacgatcagatctcactgcccccgcctccagagcttggctac
agcatcactgtgaaagacttggatgaagagaaaaaggctgccattagcaagatccagaag
gtcctggagacacctgctccagaaccagagaagtctgtcgctcccccaaccaccacttcc
agccagaccaccgcctcctctaccagctctaccgccaccaccaccctgagcagccttctc
gcagctcctctgcctacagcctccagcgctgccatcccagtcatcaacctggatcccagt
ccaggcagcagtgtcagtacggcacctgcagcctccaacccactgctggaggctctgaag
atgaaggccggcactcctgctagctccacacctgctgccagcccaaccatagtgtctgtg
tcaaccacaccagtgcaacccagtggcttcaacctgaaggcaacaactgcagtggattcc
caaaggcctccccctgcatacccgtctcagtcctccactgctggtgtggagcagccctct
gccttcactcaggtcctgagtcaggtcatgaagtcttccagcagcaccccacctgtgata
ggaccaacacttttcagactggccagccagagcagcaccctctctgctcctacagcctct
aaccccatcactgctgccaacgccccagccagcagctctgagtcagtgagtaacacaaac
cctctgctggcttcaggattcaagcccatcttcgctgtcaccaccaccacatccgcgtca
gctacgtcagctccagagagcaaacctcctgtccaaggtttcaagcccatcttcggaggt
gccactgcaggcactggctttggacaaccagccaccctcacaaccaccaacccagtctct
gcagtttctgcaactagtacatcctcaatgtttggtgtgtcaacaagcagcaccacagct
gccccatcggtttttcctggcttgaccaaccccctcacgggaacagtctccaccagcgcc
atcaccaccaccacacaacctgcaacccaaccaagtgtgaagtccctctttggtagctgg
tccacaccatctacaacaagtaccagctcagccacagtgcaggcccctaatacagggagc
acatttcagtttggaactgctaccaccacagctgcagctgcacctgccccagctgctgct
gctaccacaacctccagcaatggcggcttcacatttggtgccacgcagccggaccctcaa
gctgccaaccagaaggcatttgcctttggtcagccagcacccagccaaaactcaaccact
gcttcatttggaggctttgccatggccaatgctgcacccaccactgctactgcccccacc
cagtccacattcccctttgggaagtcttcttttggaccgacagcgacgcagtcaaatttt
ggctcctcagcagcacaatcaaaaccattcaactttggaagcaatgcagcatcatccaca
cctgcccctaacccggcccaagcttctttcaattttgggtctgctgctgccaccacagga
gctacatttgggaccccagctaaacccgcatttggagctagttccactggttttggtttt
ggtggatccactgctcccccggctgcaccccctgctgctccgagcttcggtgcagcaacc
cagactcagagctcctcctcagccacattcacatttggtaatgctgctcctcagccagct
gcctccggcccatctcagccagcacccagtggattcaactttggtgctgctatgccatgc
cctcagttcggaacaccagtggccaataatcctgcaccgcaaatgggagggttcaacttt
ggggctgctgctgctgacaaatcagcttttgggacgtctaccccatcctttggccagagt
gctgctgtaggtccaattccctttggaagtcctggaactcctgtccaaggcttcaactct
gttccatttgggtctccagcaactccctccttctctattggagctggaactaagccatct
ggggcacggcagaggctgcaggcgcggagacaacacaacaggaagaagtag
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