Hippoglossus stenolepis (Pacific halibut): 118123169
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Entry
118123169 CDS
T08308
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsp03041
]
118123169
Spliceosome [BR:
hsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118123169
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_8
Motif
Other DBs
NCBI-GeneID:
118123169
NCBI-ProteinID:
XP_035036253
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All DBs
Position
16:complement(2983542..3026190)
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AA seq
480 aa
AA seq
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MLMSTDVASIMLPVSRGIMDRERELDAAAGPLANAPGGPAAVRATKRGDPEPDAQTPAAP
LTDLPGAECKRPRIDGTGAVVADIGQNNEPLNPGFHGYPALTQGSQDSTGGQEGLVAPPF
AAFPPPPPPQNGLPGTEFVPGAMFGAGGPGTVEVGVGADGTATAAIINNSNSVKAEEESQ
GEAGVQCGTGGTGAGGSTGDPSEAKGTPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEI
IFNERGSKGFGFVTFETSADAEKAREKLHGTLVEGRKIEGTGDSLKVQKERCKRVNNATA
RVMTNKKMVSPYPNGEALSTLPYAGWKLSPMVSAMYGPELYAVPGFPYSSAAAAATTAAA
AFRGAHLRGRGRPVYSTVRAAVPQPTLPAYPGVVYQDGFYGAADLYGGYPAAAAAAAAAY
RYAQPTAVAGATAAAAAYSDSYGRVYTTDPYHALSPAAAAYGVGAMASLYRAGYSRFAPY
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcctccataatgctgcccgttagtcgggggatcatggat
cgggagagggagctcgacgcggccgccggacccctcgccaacgcgcccgggggtccggca
gctgtccgggcgacgaagcgaggggacccggagcccgacgcgcagacacccgccgcccca
ctcaccgacctgcccggggcggagtgcaagagaccgaggatagacgggaccggggctgtt
gttgctgacattggccagaacaatgagcctttaaaccctggtttccatggatacccagct
ctcactcagggctctcaggattcgacaggaggacaggagggtctggtggccccacccttc
gcagcattcccccctccacccccacctcagaacgggctcccggggacggagtttgttccg
ggggccatgtttggcgctgggggcccaggaacagtagaggtgggggttggcgctgatgga
acagccactgcagccatcatcaacaacagcaacagcgtaaaggcagaagaggaatcacag
ggcgaggcgggggtgcagtgtggtaccggaggcaccggagcgggcggctccaccggcgac
ccctcggaggccaaagggacccccaaacgcctccacgtctccaacatccccttccgcttc
cgggacccagatctcaggcagatgtttgggcaatacgggaagattctggatgtagagata
attttcaatgagaggggttcaaagggctttggctttgtgacgtttgagaccagcgcagac
gcagagaaagccagggaaaagctccacggcacattggtggaaggtcgtaagattgagggg
acaggtgacagtctgaaggtccaaaaggaaagatgtaaaagagtgaataacgccaccgcc
agggtgatgactaacaagaaaatggtcagcccttaccctaacggagaggctctcagcaca
ctgccttacgcgggttggaaactgagtccgatggtgagcgccatgtacggacccgagctg
tacgcagtccccgggttcccctactcttcagcagcagcggcagccacaacagcggcggca
gcgttccgcggcgcccaccttagaggccggggtcggcccgtctacagcaccgtacgggcc
gctgtgcctcagcccaccctccctgcgtaccctggcgtggtgtatcaggatgggttttac
ggagctgcggacttgtatggaggctaccctgctgctgctgccgctgccgccgccgcttac
cgctacgcccagccgacagccgtagctggagcaaccgccgctgctgccgcctacagtgac
agttatggccgggtttacactacagatccataccacgcgttaagtccagctgctgctgct
tacggagtcggagccatggccagtttgtaccgggcaggatacagtaggttcgctccgtac
tag
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